DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34001 and Chtf8

DIOPT Version :9

Sequence 1:NP_001033999.2 Gene:CG34001 / 3885640 FlyBaseID:FBgn0054001 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001351115.1 Gene:Chtf8 / 214987 MGIID:2443370 Length:121 Species:Mus musculus


Alignment Length:148 Identity:55/148 - (37%)
Similarity:76/148 - (51%) Gaps:31/148 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IVVKTQNA-GKGDWAIIELQGDLEVRSNQDMHGQFIGDLYYNKYGQPILIIGHHILQGREQKLDK 66
            ||:.:..| |..:|.::||||::|.|.:..:.|..:|||:|...|.|:||:|||||.|:...|:|
Mouse     4 IVISSTGAEGLAEWVLMELQGEIEARYSTGLAGNLLGDLHYTTEGIPVLIVGHHILYGKTIHLEK 68

  Fly    67 PFAVLEKSKTNEGERLLETSMASQDVSMLNATTGAERTVLDHTIAQEHKSRQRTEYTVRAVCTKK 131
            |||||.|.           :...||.......||                   |:|.|.|:...|
Mouse    69 PFAVLVKH-----------TPGKQDCDEPGRGTG-------------------TQYLVTALIKNK 103

  Fly   132 LIFKSRPKPIIANVAKSV 149
            ::||:||||||.||.|.|
Mouse   104 ILFKTRPKPIITNVPKKV 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34001NP_001033999.2 None
Chtf8NP_001351115.1 Ctf8 13..113 CDD:312999 45/129 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832393
Domainoid 1 1.000 50 1.000 Domainoid score I11703
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84588
Inparanoid 1 1.050 92 1.000 Inparanoid score I5072
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57204
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005631
OrthoInspector 1 1.000 - - oto93667
orthoMCL 1 0.900 - - OOG6_104904
Panther 1 1.100 - - LDO PTHR28605
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5048
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.930

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