DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33993 and tns1b

DIOPT Version :9

Sequence 1:NP_001033991.1 Gene:CG33993 / 3885637 FlyBaseID:FBgn0053993 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_021334702.1 Gene:tns1b / 555362 ZFINID:ZDB-GENE-030131-6933 Length:1829 Species:Danio rerio


Alignment Length:589 Identity:124/589 - (21%)
Similarity:195/589 - (33%) Gaps:195/589 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRLEPQHSKATFISSSSASSSSSQTAETTLIETAEKSPASEAAAGTVTTTS------PQHFFH-- 64
            |.|:| |:.|..:.:.:.|.|..:....:.:|:..|: |:..|:.|..:.|      |.|.::  
Zfish  1116 LGLKP-HNPAEILLNQTGSESEDEEEPRSYVESVAKA-AAVPASPTYDSDSLARPAGPSHAYNAP 1178

  Fly    65 -----------------------------------HHHPPAHPHPPRQQPHP----HSHSHPHPH 90
                                               |..|...|:.|...|:|    .|:..|.|.
Zfish  1179 LSSSSPIQNPDPVESTLADSGVGMNSLSQAAVDIFHFQPSEIPYQPPPPPYPTSMLGSYISPSPA 1243

  Fly    91 PQLQRRPVEQLHLLHS----HHDV-----------QELSGQEHP---HPQPGSHPH-PHHLRSP- 135
            ..:|........|..|    ||.:           ..|:.|:.|   ..|..::.| |....|| 
Zfish  1244 EAMQNNTTTIQPLSGSPGTRHHTILSDMASVPNFQHRLANQDGPILGRQQAPANGHVPGIAGSPV 1308

  Fly   136 -------SSEEDNSP--TEMNNCRRLVDKPPLVKRLTMGIGL-----------LRGTEDSRP--- 177
                   |....:||  :......:.:...|::.|..||..:           |.....|.|   
Zfish  1309 QGRHTMVSQGTQSSPILSRQYPVTQGIQSSPILSRQPMGQAVQSSPVLNRQASLNQANQSSPVLS 1373

  Fly   178 --------------------LMHSTCGS-------SLTSGS-------------------GCGST 196
                                |.|.:.||       |||.||                   |..|.
Zfish  1374 RQQSITLPNQGSPVLSRQSSLSHPSQGSPVLGRHPSLTQGSPSLDRHPMYSGYTTPEERHGALSR 1438

  Fly   197 QTISDGYVNEAI----CEPDKYVASKFGDSCRQSLSALE---------SATQRLQ--VELPAASK 246
            |:.|.||...:.    ..|..|:.   |...||...|.:         |::.|..  :.....:.
Zfish  1439 QSSSSGYQPPSTPSFPVSPAGYIE---GAGFRQGSPAFQPQLPEKRRMSSSDRTNGGLSYGTLNG 1500

  Fly   247 KYLRETCSANSSPKL-----FPGHSALRLDNLSLAEQQELK-----GAAWFQAGIPREISLEALS 301
            |......|..|:|.:     .|..|.|.:.:.|...:..:|     ...|::..|.|:.::..|.
Zfish  1501 KMSSPVSSGGSTPSVHFFHTLPDFSKLNMCDGSPETRMNVKFVQDTSKFWYKPDISRDQAINMLK 1565

  Fly   302 RQSPGAFLVRQSSTKPGCFALSLRV--PPPSPR------------VAHYLILRTQRGYKIKGFTK 352
            .|.||||::|.|.:..|.:.|:::|  |||:.:            |.|:||..:.:|.::||...
Zfish  1566 DQDPGAFVIRDSHSFRGAYGLAMKVASPPPTTQPTKKAGDVTNELVRHFLIETSPKGVRLKGCPN 1630

  Fly   353 E--FSSLKALITHHSVMPELLPVPLTLP-RPPSTRSQR------------SQGAYAGGTGNGGAD 402
            |  |..|.||:..||:.|..||..|.:| |.|...|..            .|||....:.:|.|.
Zfish  1631 EPYFGCLSALVYQHSITPLALPCKLVIPTRDPLEESPEIATPTNPAADMLKQGAGQKSSADGHAC 1695

  Fly   403 FEMY 406
            ..:|
Zfish  1696 NVLY 1699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33993NP_001033991.1 SH2 286..364 CDD:198173 29/93 (31%)
tns1bXP_021334702.1 C1 45..91 CDD:237996
PTPc_motif 208..323 CDD:214649
PTEN_C2 310..436 CDD:313607
Atrophin-1 <806..1199 CDD:331285 15/84 (18%)
Herpes_ICP4_C 1140..>1534 CDD:332854 70/397 (18%)
SH2_Tensin_like 1546..1661 CDD:198181 36/114 (32%)
PTB_tensin 1692..1824 CDD:269924 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45734
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.