DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33993 and Tns1

DIOPT Version :9

Sequence 1:NP_001033991.1 Gene:CG33993 / 3885637 FlyBaseID:FBgn0053993 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_038939258.1 Gene:Tns1 / 301509 RGDID:68427 Length:1937 Species:Rattus norvegicus


Alignment Length:494 Identity:122/494 - (24%)
Similarity:167/494 - (33%) Gaps:122/494 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQHSKATFISSSSASSSSSQTAETTLIETAEKSP-ASEAAAGTVTTTSPQHFFHHHHP----PAH 71
            |.:|...|  |||..|..........:.....|| |.....||.|..||.......:|    |..
  Rat  1348 PDYSLQPF--SSSPESQGQPHFSAASVHMVPGSPQARHRTVGTNTPPSPGFGRRAINPTMAAPGS 1410

  Fly    72 PHPPRQQ---------------PHPHSHSHPHPHPQLQRRPVEQLHLLHSHHDVQELSGQEHPHP 121
            |....:|               .||.|.:.....|.|.|.||....:...|..|....|.    |
  Rat  1411 PSLSHRQVMGPSGPGFHGNVVSGHPTSATVAPGSPSLGRHPVGSHQVPGLHSGVVTTPGS----P 1471

  Fly   122 QPGSHPHPHHLRSPSSEEDN------SPT---EMNNCRRLVDKPPLVKRLTMGIGLLRGTEDSRP 177
            ..|.||..|.....||...|      ||:   .:.....:|...|.:.| .:..|.....||.||
  Rat  1472 SLGRHPGAHQGNLVSSLHGNAVISPGSPSLGRHLGGSGSVVPGSPSLDR-HVAYGGYSTPEDRRP 1535

  Fly   178 LMHSTCGSSLTSGSGCGSTQTISDGYVNEAICEPDKYVASKF--GDSCRQSLSALESATQRLQVE 240
            .:               |.|:.:.||  :|...|...|:..:  |.|...:..:.:||..|....
  Rat  1536 TL---------------SRQSSASGY--QAPSTPSFPVSPAYYPGLSSPATSPSPDSAAFRQGSP 1583

  Fly   241 LPAASKK--------------YLRETCSANSSP-----------------KLFPGHSALRLDNLS 274
            .||..:|              |.......:|||                 ...|..|...:.:.|
  Rat  1584 TPALPEKRRMSVGDRAGSLPNYATINGKVSSSPVANGMASPSGSSTVSFSHTLPDFSKYSMPDNS 1648

  Fly   275 LAEQQELK-----GAAWFQAGIPREISLEALSRQSPGAFLVRQSSTKPGCFALSLRVPPPSPR-- 332
            ...:.::|     ...|::..|.||.::..|..|.||||::|.|.:..|.:.|:::|..|.|.  
  Rat  1649 PETRAKVKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIT 1713

  Fly   333 ------------VAHYLILRTQRGYKIKGFTKE--FSSLKALITHHSVMPELLPVPLTLP-RPPS 382
                        |.|:||....||.|:||...|  |.||.||:..|||:|..||..|.:| |.|:
  Rat  1714 QQGKKGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSVIPLALPCKLVIPSRDPT 1778

  Fly   383 TRSQRSQGAYAGGTGNGGADFEMYGSLNDFRKMMADLNV 421
            ..|:.|.|.              ..|..|..|..|..||
  Rat  1779 DESKDSSGP--------------ANSTTDLLKQGAACNV 1803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33993NP_001033991.1 SH2 286..364 CDD:198173 32/93 (34%)
Tns1XP_038939258.1 C1_TNS1_v 57..112 CDD:410438
PTP_DSP_cys 187..345 CDD:421693
PTEN_C2 352..478 CDD:402161
PHA03247 <718..1143 CDD:223021
PHA03247 <1091..1643 CDD:223021 69/318 (22%)
SH2_Tensin_like 1661..1776 CDD:198181 40/114 (35%)
PTB_tensin 1798..1931 CDD:269924 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45734
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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