DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33993 and Tns1

DIOPT Version :9

Sequence 1:NP_001033991.1 Gene:CG33993 / 3885637 FlyBaseID:FBgn0053993 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_006495930.2 Gene:Tns1 / 21961 MGIID:104552 Length:1922 Species:Mus musculus


Alignment Length:492 Identity:122/492 - (24%)
Similarity:166/492 - (33%) Gaps:120/492 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQHSKATFISSSSASSSSSQTAETTLIETAEKSP-ASEAAAGTVTTTSPQHFFHHHHP----PAH 71
            |.:|...|  |||..|..........:.....|| |.....||.|..||.......:|    |..
Mouse  1335 PDYSLQPF--SSSPESQGQPQYSAASVHMVPGSPQARHRTVGTNTPPSPGFGRRAVNPTMAAPGS 1397

  Fly    72 PHPPRQQ---------------PHPHSHSHPHPHPQLQRRPVEQLHLLHSHHDVQELSGQEHPHP 121
            |....:|               .||.|.:.....|.|.|.||....:...|..|....|.    |
Mouse  1398 PSLSHRQVMGPSGPGFHGNVVSGHPASAATTPGSPSLGRHPVGSHQVPGLHSSVVTTPGS----P 1458

  Fly   122 QPGSHPHPHHLRSPSSEEDN------SPT---EMNNCRRLVDKPPLVKRLTMGIGLLRGTEDSRP 177
            ..|.||..|.....||...|      ||:   .:.....:|...|.:.| ....|.....||.||
Mouse  1459 SLGRHPGAHQGNLASSLHSNAVISPGSPSLGRHLGGSGSVVPGSPSLDR-HAAYGGYSTPEDRRP 1522

  Fly   178 LMHSTCGSSLTSGSGCGSTQTISDGYVNEAICEPDKYVASKF--GDSCRQSLSALESATQRLQVE 240
            .:               |.|:.:.||  :|...|...|:..:  |.|...:..:.:||..|....
Mouse  1523 TL---------------SRQSSASGY--QAPSTPSFPVSPAYYPGLSSPATSPSPDSAAFRQGSP 1570

  Fly   241 LPAASKK--------------YLRETCSANSSP---------------KLFPGHSALRLDNLSLA 276
            .||..:|              |.......:|||               ...|..|...:.:.|..
Mouse  1571 TPALPEKRRMSVGDRAGSLPNYATINGKVSSSPVANGMASGSSTVSFSHTLPDFSKYSMPDNSPE 1635

  Fly   277 EQQELK-----GAAWFQAGIPREISLEALSRQSPGAFLVRQSSTKPGCFALSLRVPPPSPR---- 332
            .:.::|     ...|::..|.||.::..|..|.||||::|.|.:..|.:.|:::|..|.|.    
Mouse  1636 TRAKVKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTITQQ 1700

  Fly   333 ----------VAHYLILRTQRGYKIKGFTKE--FSSLKALITHHSVMPELLPVPLTLP-RPPSTR 384
                      |.|:||....||.|:||...|  |.||.||:..|||:|..||..|.:| |.|:..
Mouse  1701 GKKGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSVIPLALPCKLVIPSRDPTDE 1765

  Fly   385 SQRSQGAYAGGTGNGGADFEMYGSLNDFRKMMADLNV 421
            |:.|.|.              ..|..|..|..|..||
Mouse  1766 SKDSSGP--------------ANSTTDLLKQGAACNV 1788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33993NP_001033991.1 SH2 286..364 CDD:198173 32/93 (34%)
Tns1XP_006495930.2 C1 <79..112 CDD:381770
PTP_DSP_cys 189..347 CDD:391942
PTEN_C2 354..480 CDD:371036
PHA03247 <737..1233 CDD:223021
PHA03247 <1073..1649 CDD:223021 71/337 (21%)
SH2_Tensin_like 1646..1761 CDD:198181 40/114 (35%)
PTB_tensin 1783..1916 CDD:269924 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45734
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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