DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33993 and tns2

DIOPT Version :9

Sequence 1:NP_001033991.1 Gene:CG33993 / 3885637 FlyBaseID:FBgn0053993 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_002936689.3 Gene:tns2 / 100486792 XenbaseID:XB-GENE-988669 Length:1850 Species:Xenopus tropicalis


Alignment Length:498 Identity:117/498 - (23%)
Similarity:171/498 - (34%) Gaps:146/498 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQHSKATF-------ISSSSASSSSSQTAETTLIETAEKSPASEAAAGT-----VTTTSPQHFFH 64
            |.|| .||       ..||...|..|...:.|..|....:..||...|.     :|.:.|     
 Frog  1205 PTHS-LTFPTNNPVNTKSSPDQSDISNHTQNTSKEVHNTALPSEPQTGNCVARQITNSYP----- 1263

  Fly    65 HHHPPAHPH-------------------PPRQQPHPHS-----------HSHPHPHPQL------ 93
              |.|.|.|                   |.::....||           :|..|...||      
 Frog  1264 --HSPNHTHISEDQTPVTTAFALTETDRPQQKMVQSHSSVSVNNSSVKPYSTVHTQSQLVQTDNS 1326

  Fly    94 --QRRPVEQLH---------LLHS--HHDVQELSGQEHPHPQPGSHPHPHHLRSPSSEED----- 140
              .:.|..|||         .|||  |..:....|.:.| ..|...|.|.|..|....|.     
 Frog  1327 IESQIPPVQLHHPVPKASQAQLHSTVHTQLYRTVGGQSP-SVPTQKPVPTHPNSTVVTERPGLPA 1390

  Fly   141 ---NSPTEMNNCRRLVDKPPLVKRLTMGIGLLRGTEDSRPLMHSTCGSSLTSGSGCGSTQTISDG 202
               |:|...|....|:........:|..:  |..|.::: ..|:|.|.:::|.||   |.....|
 Frog  1391 THVNAPPCANEANTLLPTSSSQSHVTKFV--LPVTSEAK-RSHTTFGPAISSPSG---TTAFGSG 1449

  Fly   203 YVNEAICEPDKYV------------ASKFGDSCRQSLSALESATQRLQVEL---------PAASK 246
            |.:::...|...|            .|......:::.::...:....|.:|         |..:.
 Frog  1450 YCSQSFSVPKHTVLLQKRSVTISLPVSPVNPQGKEAPTSPPKSPMGSQSDLLPPSPTPSFPIRTA 1514

  Fly   247 KYLRETCSANSSPKLFP--GHS---ALRLDNLSLAE-----------QQEL---------KGAAW 286
            .|....|..:..|...|  .||   ..::|...|:|           ||::         ....|
 Frog  1515 YYSSSPCPPSIQPPRLPEKNHSPADGAKVDPNGLSECNKGHSSPVDTQQDVPVTGNFVQDSSKFW 1579

  Fly   287 FQAGIPREISLEALSRQSPGAFLVRQSSTKPGCFALSLRVPPPSPRVA--------------HYL 337
            ::..|.||.::..|....||:||:|.|::..|.:.|:|:|..|.|.||              |:|
 Frog  1580 YKPTISREQAIAILRGAEPGSFLIRDSNSFRGAYGLALKVASPPPNVAAQPYKGDSTEQLVRHFL 1644

  Fly   338 ILRTQRGYKIKGFTKE--FSSLKALITHHSVMPELLPVPLTLP 378
            |....:|.||||...|  |.||.||::.|||.|..||..|.:|
 Frog  1645 IETGPKGVKIKGSPIEPHFGSLSALVSQHSVTPLSLPCRLQIP 1687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33993NP_001033991.1 SH2 286..364 CDD:198173 33/93 (35%)
tns2XP_002936689.3 C1_TNS2 30..82 CDD:410437
PTP_tensin-2 130..288 CDD:350410
PTEN_C2 300..425 CDD:402161
PHA03247 <859..1170 CDD:223021
Herpes_BLLF1 <1040..1527 CDD:282904 67/336 (20%)
SH2_Tensin_like 1575..1690 CDD:198181 41/113 (36%)
PTB_tensin 1714..1845 CDD:269924
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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