DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir62a and Ir100a

DIOPT Version :9

Sequence 1:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:574 Identity:112/574 - (19%)
Similarity:192/574 - (33%) Gaps:140/574 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SSNHFYMLPQMTATDKDSSHVHFSSLQDEETIYLVFARDSKDAVIYLQAERARGRRYTRTMFLLR 133
            :::.||:|.....|.:|            :.:.:.||.|     ::||...:|         :..
  Fly   103 NTDGFYILALENNTIED------------DVLLMEFAAD-----VWLQHGHSR---------IYY 141

  Fly   134 KQESQKDIKYFFELLWKLQFRSALVVVAARNFYQMDPYPTVRVIRMRRLSSYDPHHVFPPANRKN 198
            .|.|:|.:..|...|.:      ||||.....|.       |:.                   |:
  Fly   142 VQLSKKSVLLFNPFLQR------LVVVQDSKTYS-------RIY-------------------KD 174

  Fly   199 FRGYRMRLPVQQDVPNTFWYKNRRTKAWELAGLGGILINQLMMHLNVTMD------------LFR 251
            ..||.:|:.:...|.::. ..:...|...:.|....|...:...||.|.|            |..
  Fly   175 LEGYHLRIYIFDSVYSSV-IGDGENKVLSVTGADAKLAKTVARQLNFTADFVWPDDEFFGGRLAN 238

  Fly   252 FEVNGSSLLNMAALTDLIVKG---KVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLDNEISR 313
            .|.:|..........|:|..|   |..|:.|          :.:|....:...|..:.....|.:
  Fly   239 GEYSGGVGRAHRGEVDIIFAGFFIKDYLTTH----------IQFSAAVYMDELCLYVKKAQRIPQ 293

  Fly   314 SLYVFLPFSLTMWLCLLFV----------LLVVHFVYVRRLIPDGHFWAILGVPGAGQVRYGN-- 366
            |:.......:.:|||.|.|          |..|:.:.....:|||.....:...||.:..:.:  
  Fly   294 SILPLFAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGSRATRISYFGAARRIFVDTW 358

  Fly   367 ----RKPVRRFSTF----LILFGIFILGQTYSTKLTSSLTVTLIR----RPDNSLEELFLLPYRI 419
                |..|.||..|    :.:..:.::...:...|.|||....||    |..|:|.||       
  Fly   359 VIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRPLYYRDVNTLREL------- 416

  Fly   420 LVLPTD-----VY----AIVDSL--GHAEQFSTKFSC-----TDAENFSQKRISMHPEYIYPIST 468
                 |     :|    |..|.|  ||..:...:...     .:.|....:.:|....:.....:
  Fly   417 -----DESGQPIYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRGGFAGVTRS 476

  Fly   469 IRWRFFDMQQRFLRKKRFYFSKICHGSFPYQYQLRVDSHLKDALHRFLLHVQQAGLHDLWLDTCY 533
            ...:..|:  |::..|:.:....|..::...|.|...|...:.::|.:|.:...|:..||.....
  Fly   477 ASLQLSDI--RYVMTKKVHKIPECPKNYHIAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTGEAK 539

  Fly   534 RKAHRMGYLKDFSTLAELEEKLRLRPLALNLLVPAFSLFLCGMLGSGIAFLVEI 587
            .:| :....:....||||:.. |.:.|.|:.:..||.....|.|.|.|..:.||
  Fly   540 ERA-KWSIQRFPEYLAELDVG-RWKVLTLSDVQLAFYALTIGCLLSAIVCMAEI 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir62aNP_001033986.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 8/44 (18%)
Lig_chan <439..580 CDD:278489 24/144 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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