DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir62a and Ir67c

DIOPT Version :9

Sequence 1:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_729609.1 Gene:Ir67c / 317838 FlyBaseID:FBgn0052058 Length:573 Species:Drosophila melanogaster


Alignment Length:653 Identity:134/653 - (20%)
Similarity:243/653 - (37%) Gaps:164/653 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YLQFLFALFL-------SRYQIVATENFDRAFELALFLD------RIGR-VHRLHAITIVNSLGS 52
            :|.||..:.|       |..:::...|.|:..:|.::||      :||: |..|    .|||...
  Fly     4 WLIFLNIILLSDRSESWSAREVIHQFNHDQQLQLNIYLDCNDVELQIGQEVSNL----FVNSTAD 64

  Fly    53 VDPSYLDDLHRGLMCNSSNHFYMLPQMTATDKDSSHVHFSSLQDEETIYLVFARDSKDAVIYLQA 117
                                     :|....:.|||         ..|...|...:::..:....
  Fly    65 -------------------------KMKILGRFSSH---------SLIIACFKDSTRNRTLNGVK 95

  Fly   118 ERARGRRYTRTMFLLRKQESQKDIKYFFELLWKLQFRSALVVVAARNF-----YQMDPYPTVRVI 177
            |...|.:|...:|::   :|..|. ||.:.|     |...:.|.|.||     |...|||.|.|.
  Fly    96 ELLWGLQYLPILFVV---DSNMDF-YFQQAL-----RHGFIHVLALNFMNGSLYTYKPYPKVEVH 151

  Fly   178 RMRRLSSYDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFWYKNRRTKAWELAGLGGILINQLMMH 242
            :::.:..:     :.....:|.:|..:|..|:...|..|.|:||..:. ..||....::.:.:..
  Fly   152 QIKDMQKF-----YKLTKLRNLQGQAVRTTVETMTPRCFRYRNRHGQL-VYAGYMYRMVKEFIST 210

  Fly   243 LNVT-------MDLFRFEVNGSSLLNMAALTDLIVKGKVELSPHLYDTLQ----SNTSVDYSYPT 296
            .|.|       :|...::...::|.|          |::::.|.:...|:    ..:.:.|:..|
  Fly   211 YNGTEEHVFGNVDTVPYKEGLAALKN----------GEIDMMPRIIHALEWYYFYRSHILYNIKT 265

  Fly   297 QVAPRCFMIPLDNEISRSLYVFLPFSLTMWLCLLFVLLVVHFVYVRRLIPDGHFWAILGVPGAGQ 361
            .:     |:|....:.:|||...||..|:|     :.::|.|||...:|    :|          
  Fly   266 YI-----MVPWAEPLPKSLYFIQPFRGTVW-----ITIMVSFVYASIVI----WW---------- 306

  Fly   362 VRY---GNRKPVRRFS-------------------------TFLILFGI-FILGQTYSTKLTSSL 397
            :||   ||....:.|.                         :|::||.. |:|...|:.:|:|.|
  Fly   307 IRYRQQGNSSLTQSFMDVLQLLFQLPLSKIWHFNMGTHQVVSFIVLFVFGFMLTNLYTAQLSSYL 371

  Fly   398 TVTLIRRPDNSLEELFLLPYRILVLPTDVYAIVDSLGH---AEQFSTKFSCTDAENFSQKRISMH 459
            |..|.:...|:.::||.....:||...|...:.:....   .::|.:....|..|...:.|.|::
  Fly   372 TTGLFKSQINTFDDLFREKRTLLVESFDAEVLHNMTKEKIIQKEFESIILITSIEEVFKHRKSLN 436

  Fly   460 PEYIYPISTIRWRFFDMQQRFLRKKRFYFSKICHGSFPYQYQLRVDSHLKDALHRFLLHVQQAGL 524
            ..|.|.....|..|...|||:||...|...|..:...|....||......:..:.:|..:.::| 
  Fly   437 TSYAYEAYEDRIAFELSQQRYLRVPIFKILKEVYDQRPVFVALRHGLPYVELFNNYLRRIFESG- 500

  Fly   525 HDLWLDTCYRKAHRMGYLKDFSTLAELEEKLRLRPLALNLLVPAFSLFLCGMLGSG-----IAFL 584
              :|:     |.....:|:..:: .|:..: :.:...:.:....|..|...:||.|     ||..
  Fly   501 --IWI-----KLQEDSFLEGIAS-GEISFR-KSKSREIKIFDKDFYFFAYILLGMGWCVSTIALF 556

  Fly   585 VEI 587
            :|:
  Fly   557 LEL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir62aNP_001033986.1 None
Ir67cNP_729609.1 Lig_chan 288..500 CDD:278489 50/230 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.