DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir62a and Ir52c

DIOPT Version :9

Sequence 1:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:643 Identity:153/643 - (23%)
Similarity:261/643 - (40%) Gaps:116/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFALFLSRYQIV-ATENFDRAFELALFLDRIGRVHRLHAITIVNSLGSVDPSYLDDLHRGLMCNS 69
            ||.|..|..||: .|.|....|:..||    |.:.||          .|:.||...|..|..|..
  Fly     8 LFCLGNSSSQILDVTNNSHLDFDYRLF----GLLQRL----------QVEKSYDTLLVYGEDCAI 58

  Fly    70 SNHFYMLPQMTATDKDSSHV----HFSSL--------QDEETIYLVFARDSKDAVIYLQAERARG 122
            .:.|..| |:.|....|...    :||||        |||.       .::...::.||.     
  Fly    59 PSLFERL-QVPAVLVSSGSTNFDWNFSSLTLILSCNFQDER-------EENYRTLMKLQT----- 110

  Fly   123 RRYTRTMFLLRKQESQKDIKYFFELLWKLQFRSALVVVAARNFYQMDPYPTVRVIR---MRRLSS 184
               :|.:.||:.....:.:..|:..  |.|...|:|   ..||||::...:.|:.:   ..:|:.
  Fly   111 ---SRRLILLKGHIKPESVCDFYSK--KEQHNVAMV---KENFYQLEVVYSCRLFQDQNYEKLNL 167

  Fly   185 YDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFWYKNRRTKAWELAGLGGILINQLMMHLNVTM-- 247
            :|...::....| |..|..:|....::.|.|..|.:.:|...:..|..|:||:|.:..:|.||  
  Fly   168 FDGKSIYKDQFR-NMHGAPIRTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQI 231

  Fly   248 --DLFR--FEVNGSSLLNMAALTDLIVKGKVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLD 308
              ||.:  .||:...:.|..: .|::..|..|..     ||:.:.....|||..::..|||.||.
  Fly   232 REDLIKDDEEVSFVDITNFTS-NDILDIGICEAR-----TLEMSNYDAISYPYLMSSYCFMAPLP 290

  Fly   309 NEISRS---LYVFLPFSLTMWLCLLFVLLVVHFVYVRR-----------LIPDGHFWAILGVPGA 359
            :.:..|   :.:..|..|.|:| ::|.:..|..:|::.           |:.|......|..|..
  Fly   291 DSLPFSDVYMAIVAPSILIMFL-IIFCICSVLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFP 354

  Fly   360 GQVRYGNRKPVRRFSTFLILFGIFILGQTYSTKLTSSLTVTLIRRPDNSLEELFLLPYRILVLPT 424
            ...:| |||  .:....|:.|...|....|:..|.:.|....|.....|.:::....|.:.:   
  Fly   355 FPRQY-NRK--LKLIFMLVCFSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAI--- 413

  Fly   425 DVY------AIVDSLGHAEQFSTKFSCTDAENFSQKRISMHPEYIYPISTIRWRFFDMQQRFLRK 483
            ::|      |:..||...|.:       |...||:.|.:.:..|::|::.::|...:.:|:..:.
  Fly   414 NIYEREFLEALNVSLEDVEIY-------DYGKFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKY 471

  Fly   484 KRFYF-SKICHGSFPYQYQLRVDSHL--KDALHRFLLHVQQAGLHDLWLDTCYRKAHR--MGYLK 543
            |.||: ...|...|.. ..:.:..||  :|.....:|..::.||...|:|..||...|  :...|
  Fly   472 KIFYYCDAFCLNQFDI-LSIPLRRHLPYRDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANLTTFK 535

  Fly   544 DFSTLAELEEKLRLRPLALNLLVPAFSLFLCGMLGSGIAFLV-----EIRHSFGCRQK 596
            |||.|.|.:.      :.::.|...|:::..|| |.|:.|.:     .:|:...|:.|
  Fly   536 DFSPLLENDY------IEVHNLYWVFTMYFVGM-GMGLCFFILEILRPLRYWRNCKIK 586



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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