DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34049 and Pi16

DIOPT Version :9

Sequence 1:NP_001033871.2 Gene:CG34049 / 3885620 FlyBaseID:FBgn0054049 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001163952.1 Gene:Pi16 / 294312 RGDID:1304760 Length:483 Species:Rattus norvegicus


Alignment Length:156 Identity:44/156 - (28%)
Similarity:72/156 - (46%) Gaps:46/156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KQAVLRETNKYRRLHNANP-------LKMDEKLCSYAQEWAD-----HLADLNKLETRPNPLYGE 198
            ||.::...|.||.  ..:|       ::.|::|.::|:.:|.     |    ||...|    .||
  Rat    39 KQTMVELHNHYRA--QVSPPASDMLQMRWDDELAAFAKAYAQKCVWGH----NKERGR----RGE 93

  Fly   199 NIMRVRRSKFSVDQILKLWYQEKYNYDYLKPGFNLYT---------GHFTQLVWRESEFLGVGV- 253
            |:..:......|...:..|::|   ::|    :||.|         ||:||:||.::|.:|.|. 
  Rat    94 NLFAITDEGMDVPLAVGNWHEE---HEY----YNLSTATCDPGQMCGHYTQVVWSKTERIGCGSH 151

  Fly   254 ACDV------SSI-WIVCNYHPPGNV 272
            .|:.      ::| .:||||.|||||
  Rat   152 FCETLQGVEEANIHLLVCNYEPPGNV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34049NP_001033871.2 SCP_GAPR-1_like 146..272 CDD:240182 42/154 (27%)
Pi16NP_001163952.1 SCP_HrTT-1 39..172 CDD:240186 38/149 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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