Protein Alignment CG34049 and vap-2

DIOPT Version :10

• Sequence 1: NP_001033871.2
• Gene: CG34049 / 3885620
• FlyBaseID: FBgn0054049
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_001300377.1
• Gene: vap-2 / 181273
• WormBaseID: WBGene00011462
• Length: 507
• Species: Caenorhabditis elegans
• Alignment Length: 274
• Identity: 65/274 - (23%)
• Similarity: 98/274 - (35%)
• Gaps: 84/274 - (30%)

  Fly    51 KIYHNSRNYLACEVQRSQSINSIKSLPVKFPSTPNRSLNTEKD--WSHGKRCLQCAAPKCKTSSR 113
            |.|....:|:.|....|          ..|....|.....||:  :.:||.|  |....|.|...
 Worm   229 KTYRVGCSYIMCGDGES----------ALFTCLYNEKAQCEKEMIYENGKPC--CEDKDCFTYPG 281

  Fly   114 SS-------IQSKKLKKD-------KKSLLKEFEIYKIPIIRRKPIKQAVLRETNKYR-RL---- 159
            |.       .|:..:.||       ..||:.:.            .:...|.:.|.|| ||
 Worm   282 SKCLVPEGLCQAPSMVKDDGGSFQCDNSLVSDV------------TRNFTLEQHNFYRSRLAKGF 334

  Fly   160 ------HNANP-----LKM--DEKLCSYAQEWADHLADLNKLE-TRPNPLYGENIMRVRRSKFS- 209
                  :.:.|     :||  |..|..:||.||::....:... .|||  .|:|:.   .|.||
 Worm   335 EWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAHSAHYERPN--QGQNLY---MSSFSN 394

  Fly   210 ------VDQILKLWYQEKYNYDYLKPGFNLYT-----------GHFTQLVWRESEFLGVGVACDV 257
                  :...::.|:||...:.  .|..|:.|           ||:||:.|..:..||.|:|...
 Worm   395 PDPRSLIHTAVEKWWQELEEFG--TPIDNVLTPELWDLKGKAIGHYTQMAWDRTYRLGCGIANCP 457

  Fly   258 SSIWIVCNYHPPGN 271
            ...::||:|.|.||
 Worm   458 KMSYVVCHYGPAGN 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34049	NP_001033871.2	CAP_GAPR1-like	145..272	CDD:349401	44/164 (27%)
vap-2	NP_001300377.1	SCP	104..253	CDD:214553	6/33 (18%)
		SCP	315..468	CDD:214553	41/159 (26%)