DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34049 and Crispld2

DIOPT Version :9

Sequence 1:NP_001033871.2 Gene:CG34049 / 3885620 FlyBaseID:FBgn0054049 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_612527.2 Gene:Crispld2 / 171547 RGDID:620860 Length:497 Species:Rattus norvegicus


Alignment Length:158 Identity:44/158 - (27%)
Similarity:57/158 - (36%) Gaps:40/158 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KQAVLRETNK-----YRRLHNANPLKMDEKLCSYAQEWADHLADLNKLETRPNPL---YGENIM- 201
            :|.:|...||     |....|...:..||:|...|..||....    .|..|..|   .|:|:. 
  Rat    56 RQEILMLHNKLRGQVYPPASNMEYMTWDEELERSAAAWAQRCL----WEHGPASLLVSIGQNLAV 116

  Fly   202 ---RVRRSKFSVDQILKLWYQEKYNYDYLKPG----------FNLYTGHFTQLVWRESEFLGVGV 253
               |.|...|.|..    ||.|..:|.|..|.          ......|:||:||..:..:|..|
  Rat   117 HWGRYRSPGFHVQS----WYDEVKDYTYPYPHECNPWCPERCSGAMCTHYTQMVWATTNKIGCAV 177

  Fly   254 -ACDVSSIW---------IVCNYHPPGN 271
             .|...|:|         :||||.|.||
  Rat   178 HTCRSMSVWGDIWENAVYLVCNYSPKGN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34049NP_001033871.2 SCP_GAPR-1_like 146..272 CDD:240182 44/158 (28%)
Crispld2NP_612527.2 SCP_euk 56..201 CDD:240180 40/152 (26%)
LCCL 286..370 CDD:128866
LCCL 389..487 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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