DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34049 and glipr1a

DIOPT Version :10

Sequence 1:NP_001033871.2 Gene:CG34049 / 3885620 FlyBaseID:FBgn0054049 Length:306 Species:Drosophila melanogaster
Sequence 2:XP_017210734.1 Gene:glipr1a / 108179203 ZFINID:ZDB-GENE-110309-2 Length:269 Species:Danio rerio


Alignment Length:164 Identity:48/164 - (29%)
Similarity:68/164 - (41%) Gaps:29/164 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 YKIPIIRRKPIKQAVLRETNKYR-----RLHNANPLKMDEKLCSYAQEWA-----DHLADLNKLE 189
            |...|..|..|.:.| ||.|:.|     ...|...:..|..|...|:.||     .|...|.:.:
Zfish    22 YLFDITDRAFIDECV-REHNQNRSSVSPTAANMRYMTWDAALAVTARAWARFCLFKHNIHLREAK 85

  Fly   190 TRPNPLY---GENIMR-VRRSKFSVDQILKLWYQE--KYNYDYLKPGFNLYTGHFTQLVWRESEF 248
             |.:|.:   ||||.. ...|:|:|...:..|..|  .|||:..:.......||:||:||.:|..
Zfish    86 -RVHPTFTTVGENIWAGAPYSRFTVKSAVFSWVNELKDYNYNNNQCNDKKVCGHYTQVVWADSYK 149

  Fly   249 LGV-------GVA----CDVSSIWIVCNYHPPGN 271
            :|.       |||    .::..:..||||...||
Zfish   150 VGCAVQTCPNGVAETHFSNIQGVIFVCNYATAGN 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34049NP_001033871.2 CAP_GAPR1-like 145..272 CDD:349401 45/154 (29%)
glipr1aXP_017210734.1 CAP_GLIPR1-like 30..182 CDD:349404 43/153 (28%)

Return to query results.
Submit another query.