DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and Asic1

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:530 Identity:91/530 - (17%)
Similarity:169/530 - (31%) Gaps:161/530 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VLYFNNCCIHGFRYLTDSMLILFE------KFLWLILLIASI--YFCIIVCLSSIDR--YYTKST 74
            |.:.|:|.:||..:      :..|      :.||.:..:.::  :.|.:.     ||  ||....
  Rat    64 VAFANSCTLHGASH------VFVEGGPGPRQALWAVAFVIALGAFLCQVG-----DRVAYYLSYP 117

  Fly    75 HIGIERNYIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQN 139
            |:.:...........|:||              :|..|.::             |:..:|.:...
  Rat   118 HVTLLDEVATTELVFPAVT--------------FCNTNAVR-------------LSQLSYPDLLY 155

  Fly   140 IPQNEQIDQIIEDIGLK-----PEHYTELIYNL--TYDRTYEPNFNERIRCMDGAMFIHVRQVLT 197
            :.....:|: .:|.|:.     ||.::...:||  .|:|:..       |..|..::        
  Rat   156 LAPMLGLDE-SDDPGVPLAPPGPEAFSGEPFNLHRFYNRSCH-------RLEDMLLY-------- 204

  Fly   198 EWGLC-YLGNSKLTEEYSSRYFIFGKYPEYNKYEYENIRLPYQVGSF---------FQKDTQYAL 252
                | |.|.......:|..:..:||...:|..:....||....|..         .|:|....:
  Rat   205 ----CSYCGGPCGPHNFSVVFTRYGKCYTFNSGQDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPV 265

  Fly   253 LG------FKGPAIIAFAHSAFEVMKVDSNSDYAYDGILYDLSTEE---------------ITAE 296
            .|      |:. .|....||..|...:|........|....:|.:|               :|.:
  Rat   266 WGETDETSFEA-GIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRLIYLPSPWGTCNAVTMD 329

  Fly   297 DNLEQDTTVAMRRCRFPHESNLTHFPFYTRNICQQECRINLAYKICKCIPHFYPNRIANPKPVCD 361
            .:.                     |..|:...|:.:|......:.|.|.....|    ...|.|.
  Rat   330 SDF---------------------FDSYSITACRIDCETRYLVENCNCRMVHMP----GDAPYCT 369

  Fly   362 YKTLRSCFPHHASFFLKLYEENGKHENPAICYCEQNC----HDSVVTMKSMNPMSGAKQLLGG-- 420
            .:..:.|......|.::..:|        .|.||..|    :...::|..:...:.||.|...  
  Rat   370 PEQYKECADPALDFLVEKDQE--------YCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFN 426

  Fly   421 -----IGSAVSV-----KTWPQSRLRRQVIFSLTDLLVSIGGTAGLFLGFSVLGFVEVIYFFTIR 475
                 ||..:.|     :......:.::..:.:..||..|||..|||:|.|:|..:|:..:    
  Rat   427 KSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDY---- 487

  Fly   476 IVFQILGYTL 485
             .::::.:.|
  Rat   488 -AYEVIKHRL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 89/512 (17%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 91/530 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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