DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic1c

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:564 Identity:103/564 - (18%)
Similarity:185/564 - (32%) Gaps:189/564 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NGLKIVINYFVLYFNNCCIHGFRYLTDSMLILFEKFLWLILLIASIYFCIIVCLS-----SIDRY 69
            :.:|.:...|||   ...:||.::.........::..||:.|        :|||.     |.:|.
Zfish    32 HNIKDITTAFVL---RTKVHGLKHAFSPHKSKTQRLFWLLAL--------LVCLGLLFTWSWNRI 85

  Fly    70 YTKSTHIGIERNYIFW--NTTLPSVTVCPVDRLNIT-------YFADYCRNNGIKGPQRDILWDF 125
            ....::..:.:.|:.|  |.|.|::|.|..:||.::       |::.|         ..|||  .
Zfish    86 LYLLSYPAVTKIYMVWSNNMTFPAITFCNQNRLRVSSLTRDDLYYSGY---------WMDIL--H 139

  Fly   126 LENLANSTYINF------------------------QNIPQNEQIDQI---IEDIGLKPEHYTEL 163
            |.:..|...::.                        |::...|.||::   ::|:.|:.....| 
Zfish   140 LNHTLNRQSVSMLKHSRHRERLLHLLDFSHYSPPPDQSLNTTEMIDRLGHQLQDMLLECRFRGE- 203

  Fly   164 IYNLTYDRTYEPNFNERIRCMDGAMFIHVRQVLTEWGLCYLGNSKLTEEYSSRYFIFGKYPEYNK 228
              |.|| :.:.|                   :.|.:|.||..||.|                   
Zfish   204 --NCTY-KNFTP-------------------IYTRYGKCYTFNSGL------------------- 227

  Fly   229 YEYENIRLPYQVGSFFQKDTQYALLGFKGPAIIAFAHSAFEVMKVDSNSDYA-----YDGILYDL 288
                              |....|...||.     ..:..|:|......:|.     .|...|:.
Zfish   228 ------------------DGNPLLTTLKGG-----TGNGLEIMLDIQQDEYLPVWGDTDETSYEA 269

  Fly   289 STE-EITAEDN---LEQ---------DTTVAMRR------------CR-FPHESNLTHFPFYTRN 327
            ..: :|.::|.   ::|         .|.|:.::            || .|.:|.  :|..|:..
Zfish   270 GIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLLYLPPPWGDCRSAPMDSE--YFSTYSIT 332

  Fly   328 ICQQECRINLAYKICKCIPHFYPNRIANPKPVCDYKTLRSCFPHHASFFLKLYEENGKHENPAIC 392
            .|:.:|......:.|.|.....|    ....||..:..:.|......|   |.|::..:     |
Zfish   333 ACRIDCETRYLLENCNCRMVHMP----GTSTVCTPEQYKDCADPALDF---LVEKDNDY-----C 385

  Fly   393 YCEQNC----HDSVVTMKSMNPMSGAKQLLGGIGSA------------VSVKTWPQSRLRRQVIF 441
            .|:..|    :...::|..:...:.||.|.......            :..:.....::.::..:
Zfish   386 VCDTPCNMTRYGKELSMVKIPSKASAKYLAKKFNKTEQYITDNILVLDIFFEALNYEKIEQKKAY 450

  Fly   442 SLTDLLVSIGGTAGLFLGFSVLGFVEVIYFFTIRIVFQILGYTL 485
            .:..||..|||..|||:|.|||..:|:..:....:..:|||..|
Zfish   451 EVAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVLKDKILGSVL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 95/536 (18%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 103/562 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.