DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic2

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_005164179.1 Gene:asic2 / 407669 ZFINID:ZDB-GENE-040513-4 Length:564 Species:Danio rerio


Alignment Length:536 Identity:103/536 - (19%)
Similarity:177/536 - (33%) Gaps:201/536 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IHGFRYLTDSMLILFEKFLWLILLIASIYFCIIVCLS-----SIDR---YYTKSTHIGIERNYIF 84
            :||.|::......|..:..|:|.      ||  .||.     |.:|   :....||   .|.:..
Zfish    73 LHGLRHICSPSNSLSRRAFWMIA------FC--TCLGLLLSWSSNRLLHWLAFPTH---TRVHTE 126

  Fly    85 WNTTL--PSVTVC---PVDRLNIT----YFADY-----CRNNGIKGPQRDILWD----FLENLAN 131
            |...|  |:||:|   ||...::|    |||.:     ..|...:....|:|.|    :...|::
Zfish   127 WAKELAFPTVTICNNNPVRLYHLTKSDLYFAGHWLGLLLANRTARPLVLDLLQDDRRGWFSKLSD 191

  Fly   132 -----------STYINFQNIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDRTYEP----NFNERI 181
                       .|.:.|.     :::...:||:.|..::            ..||    ||:   
Zfish   192 FRLFLPPRRFEGTSLEFM-----DRLGHQLEDMLLACKY------------RGEPCGAHNFS--- 236

  Fly   182 RCMDGAMFIHVRQVLTEWGLCYLGNSKLTEEYSSRYFIFGKYPEYNKYEYENIRLPYQVGS---- 242
                        .|.|.:|.||:.|:  .||        ||          .:|...:.|:    
Zfish   237 ------------TVFTRYGKCYMFNA--AEE--------GK----------TLRTTMKGGTGNGL 269

  Fly   243 ----FFQKDTQYALLGFKGPAIIAFAHSAFEV---MKVDSNSD--YAYD---GILYDLSTEEITA 295
                ..|:|....:.|       ....:|||.   :::.|.::  :.::   |:.....|...|.
Zfish   270 EIMLDIQQDEYLPVWG-------ETEETAFEAGVRVQIHSQAEPPFVHELGFGVAPGFQTFVATQ 327

  Fly   296 EDNLE-------QDTTVAMRRCRFPHESNLTHFPFYTRNICQQECRINLAYKICKCIPHFYPNRI 353
            |..|.       :..:.|:       :|.|  |..|:.:.|:.||......:.|.|...:.|   
Zfish   328 EQRLTYLPPPWGECVSRAL-------DSGL--FQVYSVSACRIECETRYIVENCNCRMVYMP--- 380

  Fly   354 ANPKPVCDYKTLRSCFPHHASFFLKLYEENGKHENPAI----------CYCEQNC----HDSVVT 404
             ...|.|..:..:.|                  ..||:          |.|...|    ::..::
Zfish   381 -GDSPYCTPEQYKDC------------------AEPALAALSAVEGTNCICRSPCNMTRYNKELS 426

  Fly   405 MKSMNPMSGAKQL-----------------LGGIGSAVSVKTWPQSRLRRQVIFSLTDLLVSIGG 452
            |..:...:.|:.|                 |.....|::.:|..|.:     .:.:..||..|||
Zfish   427 MVKIPSKTSARYLEKKFNRSEKYITDNILVLDVFFEALNYETIEQKK-----AYEVAGLLGDIGG 486

  Fly   453 TAGLFLGFSVLGFVEV 468
            ..|||:|.|:|..:|:
Zfish   487 QMGLFIGASILTLLEL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 103/536 (19%)
asic2XP_005164179.1 ASC 71..538 CDD:295594 103/536 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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