DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic4a

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_999952.1 Gene:asic4a / 407668 ZFINID:ZDB-GENE-040513-5 Length:539 Species:Danio rerio


Alignment Length:506 Identity:103/506 - (20%)
Similarity:173/506 - (34%) Gaps:136/506 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IHGFRYLTDSMLILFEKFLWLILLIASI---YFCIIVCLSSIDRYYTKSTHIGIERNYIFWNTTL 89
            :||..::..|..:...:.||.:..:.|:   .:....|..|    |.:..|:.............
Zfish    50 LHGINHIFVSGRLGVRQTLWALAFLVSLALFLYQAAKCAIS----YLEHPHVTALNEEATPEMVF 110

  Fly    90 PSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQNIPQNEQIDQIIEDIG 154
            |:||:|.::|...:...|           .||.     :|||.|.:.    |:|:.        |
Zfish   111 PAVTICNINRFRFSALTD-----------ADIY-----HLANLTGLP----PKNKD--------G 147

  Fly   155 LKPEHYTEL---------IYNLTYDRTYEP----NFNERIRCMDGAMFIHVRQVLTEWGLCYLGN 206
            .||   |:|         |:|.|..:..|.    ||:.: .|......:    |.|.:|.||..|
Zfish   148 HKP---TDLEYPAPDMQDIFNRTGHQLEEMLKSCNFSGQ-NCSAEDFTV----VYTRYGKCYTFN 204

  Fly   207 SKLTEEYSSRYFIFGKYPEYNKYEYENIRLPYQVGSFFQ--KDTQYALL--GFKGPAIIAFAHSA 267
            ...|....::....|...|        |.|..|...:..  |:|....|  |.:           
Zfish   205 GNKTTSRKTKQGGMGNGLE--------IMLDIQQDDYLPIWKETNETSLEAGIR----------- 250

  Fly   268 FEVMKVDSNSDYAYDGIL-YDLSTEEITAEDNLEQDTTVAMR---RCRFPHESNLTHFPFYTRNI 328
               :::.|..:..|...| :.:|....|.....||..|...:   .||...|..:..:..|:.:.
Zfish   251 ---VQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRSTSEQMIPGYDTYSISA 312

  Fly   329 CQQECRINLAYKICKCIPHFYPN--RIANPKPV-CDYKTLRSCFPHHASFFLKLYEENGKHENPA 390
            |:..|......:.|||.....|.  .|..|..: |..|.|           ..|.:.:|.     
Zfish   313 CRLRCETLEVLRECKCRMVHMPGDANICTPSDIKCVDKAL-----------ALLQKSSGD----- 361

  Fly   391 ICYCEQNC----HDSVVTMKSMNPMSGAKQL-----------------LGGIGSAVSVKTWPQSR 434
            .|:||..|    :...::|..:.....|:.|                 |.....|::.:|..|.:
Zfish   362 TCFCETPCNLTRYGKELSMVKIPSKGSARYLSRKYDKSEDYIRDNFLVLDIFFEALNYETIEQKK 426

  Fly   435 LRRQVIFSLTDLLVSIGGTAGLFLGFSVLGFVEVIYFFTIRIVFQILGYTL 485
                 .:.:..||..|||..|||:|.|||..:|::.:     |::::.:.|
Zfish   427 -----AYDVAGLLGDIGGQMGLFIGASVLTILEILDY-----VYEVIKHRL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 101/490 (21%)
asic4aNP_999952.1 ASC 44..472 CDD:295594 103/506 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..494
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.