DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and scnn1a

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001184124.1 Gene:scnn1a / 395013 XenbaseID:XB-GENE-996083 Length:633 Species:Xenopus tropicalis


Alignment Length:627 Identity:110/627 - (17%)
Similarity:174/627 - (27%) Gaps:278/627 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKYRNGLKIVINYFVLYFNNCCIHGFRYLTDSMLILFEKFLWLILLIASI-------------YF 57
            |.||       ..|..:.:|..|||...|..|.....:...||:|.:|:.             ||
 Frog    17 SSYR-------ELFEFFCSNTTIHGAIRLVCSRSNRMKTAFWLVLFLATFGLMYWQFGLLFGQYF 74

  Fly    58 CIIVCLSSIDRYYTKSTHIGIERNYIFWNTTLPSVTVCPVD----------------RLNITYFA 106
            .           |..|.::.:..:.:    ..|:||||.::                ....|.:.
 Frog    75 S-----------YPVSINLNVNSDKL----PFPAVTVCTLNPYRYKAIQNDLQELDKETQRTLYE 124

  Fly   107 DYCRNN-GIKG------------------------------PQRDIL----------WDFLENLA 130
            .|..|: |::|                              ..|.::          |:....|.
 Frog   125 LYKYNSTGVQGWIPTNQRVRRDRPGLPHLLELVPPGSKTHRVSRSVIEEELQVKRREWNIGFKLC 189

  Fly   131 NST-----------------------YIN-FQNIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDR 171
            |.|                       ||| ...:|:...||      |.:.|::           
 Frog   190 NETGGDCFYQTYTSGVDAIREWYRFHYINILARVPEEAAID------GEQLENF----------- 237

  Fly   172 TYEPNFNERIRCMDGAMFIHVRQVLTEWGLCYL------GNSKL-----------------TEEY 213
            .:...|||. .|.. |.:.|....:  :|.||.      |.|.|                 ||::
 Frog   238 IFACRFNEE-SCTK-ANYSHFHHAI--YGNCYTFNQNRSGQSNLWSSSMPGIKNGLTLILRTEQH 298

  Fly   214 ----------SSRYFIFG-KYPEYNKYEYENIRLPYQVGSFFQKDTQYALLGFKGPAIIAFAHSA 267
                      .:|..:.| |.|.:......||....:.....:|:|...:.|             
 Frog   299 DYIPLLSSVAGARVLVHGHKEPAFMDDSGFNIPPGMETSIGMKKETVNRMGG------------- 350

  Fly   268 FEVMKVDSNSDYAYDGILYDLSTEEITAEDNLEQDTTVAMRRCRFPHESNLTHFPFYTRNICQQE 332
                   ..||.:.||       .::..::..|.:                     ||..:|.:.
 Frog   351 -------KYSDCSEDG-------SDVDVKNLFESE---------------------YTEQVCVRS 380

  Fly   333 CRINLAYKICKCIPHFYPNRIANPKPVCDYKTLRS---CFPHHASFFLKLYEENGKHENPAICYC 394
            |......:.|.|...|||  ::.....|||...:|   |       :.||..|...::......|
 Frog   381 CFQAAMVERCGCGYAFYP--LSPGDEFCDYNKHKSWGHC-------YYKLIIEFTSNKLGCFSKC 436

  Fly   395 EQNCHDSVVTMKSMNPMSGAKQLLGGIG---SAVSVKTWPQSRLRRQVIFSLTD----------- 445
            .:.|            :....||..|..   :.|| :.|....|.||  ::|||           
 Frog   437 RKPC------------LVSEYQLTAGYSKWPNRVS-QDWVFHTLSRQ--YNLTDRNGIAKLNIYF 486

  Fly   446 ------------------LLVSIGGTAGLFLGFSVLGFVEVI 469
                              ||..:|....|:.|.|||..||::
 Frog   487 EELNYKTIQESPTINMVMLLSLLGSQWSLWFGSSVLSVVEML 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 106/611 (17%)
scnn1aNP_001184124.1 ENaC 18..602 CDD:273304 109/626 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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