DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and Scnn1a

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus


Alignment Length:606 Identity:119/606 - (19%)
Similarity:193/606 - (31%) Gaps:220/606 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FVLYFNNCCIHGFRYLTDSMLILFEKFLWLILLIASI-----YFCIIVCLSSIDRY--YTKSTHI 76
            |..:.||..|||...|..|.....:...|.:|.:.:.     .|.::     .:.|  |..|.:|
  Rat    85 FQFFCNNTTIHGAIRLVCSKHNRMKTAFWAVLWLCTFGMMYWQFALL-----FEEYLSYPVSLNI 144

  Fly    77 GIERNYIFWNTTLPSVTVCPVDRLNIT----------------------YFADYCRNNGI-KGPQ 118
            .:..:.:    ..|:||||.::....|                      |.:.|.|..|. :...
  Rat   145 NLNSDKL----VFPAVTVCTLNPYRYTEIKEELEELDRITEQTLFDLYKYNSSYTRQAGARRRSS 205

  Fly   119 RDILWDF---LENL-------------ANSTYINFQNIPQNEQIDQIIEDIG--LKPEHYTELIY 165
            ||:|..|   |:.|             :.|:.:.    ..|.|:|:....||  |..::.::..|
  Rat   206 RDLLGAFPHPLQRLRTPPPPYSGRTARSGSSSVR----DNNPQVDRKDWKIGFQLCNQNKSDCFY 266

  Fly   166 NLTYDRTYEPNFNERIRCMDGAMFIHVRQVLTEWGLCYLGNSKLTEEYSSRYFI----FGKYPEY 226
                 :||.... :.:|......:|::...|::       .|...||.:...||    |.:.| .
  Rat   267 -----QTYSSGV-DAVREWYRFHYINILSRLSD-------TSPALEEEALGNFIFTCRFNQAP-C 317

  Fly   227 NKYEYENIRLPYQVGSFFQKDTQYALLGFKGPAIIAFAHSAFEVMKVDSNSDYAYDGILYDLSTE 291
            |:..|.....|.....:...|...:.|..                   |:.....:|:...|.||
  Rat   318 NQANYSKFHHPMYGNCYTFNDKNNSNLWM-------------------SSMPGVNNGLSLTLRTE 363

  Fly   292 E----------------ITAED----------NLEQ--DTTVAMRR------------CRFPHES 316
            :                :..:|          ||..  :|:::||:            |    ..
  Rat   364 QNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKEALDSLGGNYGDC----TE 424

  Fly   317 NLTHFPF-------YTRNICQQECRINLAYKICKCIPHFYPNRIANPKPV--CDYKTLRS---CF 369
            |.:..|.       ||:.:|...|......|.|.|...|||    .||.|  |||:...|   |:
  Rat   425 NGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYP----KPKGVEFCDYRKQSSWGYCY 485

  Fly   370 PHHASFFLKLYEENGKHENPAI-CY--CEQNCHDSVVTMKSMNPMSGAKQLLGGIGSAVSVKT-- 429
                      |:..|.....:: |:  |.:.|  ||:..|          |..|.....|||:  
  Rat   486 ----------YKLQGAFSLDSLGCFSKCRKPC--SVINYK----------LSAGYSRWPSVKSQD 528

  Fly   430 WPQSRLRRQ----------------VIF--------------SLTDLLVSIGGTAGLFLGFSVLG 464
            |....|..|                :.|              ::..||.::|....|:.|.|||.
  Rat   529 WIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYKTNSESPSVTMVSLLSNLGSQWSLWFGSSVLS 593

  Fly   465 FVEVIYFFTIRIVFQILGYTL 485
            .||:     ..::|.:|..||
  Rat   594 VVEM-----AELIFDLLVITL 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 114/587 (19%)
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 119/606 (20%)
deg-1 88..600 CDD:273309 114/592 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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