DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk10 and Scnn1b

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:610 Identity:122/610 - (20%)
Similarity:196/610 - (32%) Gaps:237/610 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VLYFNNCCIHGFRYLTDSMLILFE----KFLWLILLIASIYFCIIVCLS---SIDRYYTKSTHIG 77
            |.|.||...||      ...|:.|    |.:|.:|   ::.|..:||..   .|..|.  |..:.
  Rat    27 VWYCNNTNTHG------PKRIICEGPKKKAMWFLL---TLLFACLVCWQWGVFIQTYL--SWEVS 80

  Fly    78 IERNYIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENL-----------AN 131
            :..:..|.....|:||||     |.:.| .|.:   :|...:| |:..:|.:           .|
  Rat    81 VSLSMGFKTMNFPAVTVC-----NSSPF-QYSK---VKHLLKD-LYKLMEAVLDKILAPKSSHTN 135

  Fly   132 ST-YINFQ--NIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDRTYEPN-------------FNER 180
            :| .:||.  |......||:      ..|:|  .::.||..|.....|             ...|
  Rat   136 TTSTLNFTIWNHTPLVLIDE------RNPDH--PVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMR 192

  Fly   181 IRCMDGAM-----FIHVRQVLTEWGL----------------------------CYLGNSKLTEE 212
            :...:|.:     |....|.:|||.:                            |..|    ||.
  Rat   193 LCSANGTVCTFRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMGYAPDRIILACLFG----TEP 253

  Fly   213 YSSRYF--IFGKYPEY-NKYEYE-----------------NIRLPYQVGSFFQKDTQYALLGFKG 257
            .|.|.|  ||  ||:| |.|.:.                 .::|...:|   |:|....|....|
  Rat   254 CSHRNFTPIF--YPDYGNCYIFNWGMTEKALPSANPGTEFGLKLILDIG---QEDYVPFLASTAG 313

  Fly   258 PAIIAFAHSAFEVMKVDSNSDYAYD------GILYD-------------LSTEEITAEDNLEQD- 302
            ..::......:..::  ....||..      |:|.|             ::..:: |..||..| 
  Rat   314 ARLMLHEQRTYPFIR--EEGIYAMAGTETSIGVLLDKLQGKGEPYSPCTMNGSDV-AIQNLYSDY 375

  Fly   303 -TTVAMRRCRFPHESNLTHFPFYTRNICQQECRINLAYKICKCIPHFYPNRIANPKPVCDYKTLR 366
             ||.:::.|               .:.|.|:..|:    .|.|..:.||  :...:..|:.:.  
  Rat   376 NTTYSIQAC---------------LHSCFQDHMIH----NCSCGHYLYP--LPAGEKYCNNRD-- 417

  Fly   367 SCFPHHASFFLKLYEENGKHENPAICYCEQNCHDSVVTMKSMNPMSGAKQLLGGIGSAVSVKTWP 431
              ||..|..:|.|.....:.|. .:..|:::|:|:...|                  .:|:..||
  Rat   418 --FPDWAYCYLSLQMSVVQRET-CLSMCKESCNDTQYKM------------------TISMADWP 461

  Fly   432 -------------QSR-------LRRQVIFSLTD--------------------LLVSIGGTAGL 456
                         |.|       |.|:.|..|..                    ||.::||..|.
  Rat   462 SEASEDWILHVLSQERDQSSNITLSRKGIVKLNIYFQEFNYRTIEESPANNIVWLLSNLGGQFGF 526

  Fly   457 FLGFSVLGFVE----VIYFFTIRIV 477
            ::|.|||..:|    :|.|..|.::
  Rat   527 WMGGSVLCLIEFGEIIIDFIWITVI 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 119/600 (20%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 122/610 (20%)
deg-1 29..538 CDD:273309 117/593 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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