DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and Scnn1b

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001258952.1 Gene:Scnn1b / 20277 MGIID:104696 Length:638 Species:Mus musculus


Alignment Length:599 Identity:115/599 - (19%)
Similarity:193/599 - (32%) Gaps:215/599 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VLYFNNCCIHGFRYLTDSMLILFE----KFLWLILLIASIYFCIIVCLS---SIDRYYTKSTHIG 77
            |.|.||...||      ...|:.|    |.:|.:|   ::.|..:||..   .|..|.  |..:.
Mouse    27 VWYCNNTNTHG------PKRIICEGPKKKAMWFLL---TLLFACLVCWQWGVFIQTYL--SWEVS 80

  Fly    78 IERNYIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENL-------ANST-Y 134
            :..:..|.....|:||||     |.:.| .|.:...:.....:::...||.:       :|:| .
Mouse    81 VSLSMGFKTMNFPAVTVC-----NSSPF-QYSKVKHLLKDLDELMEAVLEKILAPEASHSNTTRT 139

  Fly   135 INFQ--NIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDRTYEPN-------------FNERIRCM 184
            :||.  |......||:      ..|:|  .::.||..|.....|             ...|:...
Mouse   140 LNFTIWNHTPLVLIDE------RNPDH--PVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMRLCSA 196

  Fly   185 DGAM-----FIHVRQVLTEWGL----------------------------CYLGNSKLTEEYSSR 216
            :|.:     |....|.:|||.:                            |..|    ||..|.|
Mouse   197 NGTVCTLRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMGYAPDRIILACLFG----TEPCSHR 257

  Fly   217 YF--IFGKYPEY-NKYEYE-----------------NIRLPYQVGSFFQKDTQYALLGFKGPAII 261
            .|  ||  ||:| |.|.:.                 .::|...:|   |:|....|....|..::
Mouse   258 NFTPIF--YPDYGNCYIFNWGMTEETLPSANPGTEFGLKLILDIG---QEDYVPFLASTAGARLM 317

  Fly   262 AFAHSAFEVMKVDSNSDYAYDGILYDLSTEEIT---AEDNLEQ-----------DTTVAMRRCRF 312
            ......:..::.:.         :|.::..|.:   ..|.|::           .:.||::....
Mouse   318 LHEQRTYPFIREEG---------IYAMAGTETSIGVLVDKLQRKGEPYSPCTMNGSDVAIKNLYS 373

  Fly   313 PHESNLTHFPFYTRNICQQECRINLAYKICKCIPHFYPNRIANPKPVCDYKTLRSCFPHHASFFL 377
            .:.:.      |:...|...|..:...:.|.|..:.||  :...:..|:.:.    ||..|..:|
Mouse   374 VYNTT------YSIQACLHSCFQDHMIRNCSCGHYLYP--LPEGEKYCNNRD----FPDWAYCYL 426

  Fly   378 KLYEENGKHENPAICYCEQNCHDSVVTMKSMNPMSGAKQLLGGIGSAVSVKTWP----------- 431
            .|.....:.|. .:..|:::|:|:...|                  .:|:..||           
Mouse   427 NLQMSVTQRET-CLSMCKESCNDTQYKM------------------TISMADWPSEASEDWILHV 472

  Fly   432 --QSR-------LRRQVIFSLTD--------------------LLVSIGGTAGLFLGFSVLGFVE 467
              |.|       |.|:.|..|..                    ||.::||..|.::|.|||..:|
Mouse   473 LSQERDQSSNITLSRKGIVKLNIYFQEFNYRTIEESPANNIVWLLSNLGGQFGFWMGGSVLCLIE 537

  Fly   468 ----VIYFFTIRIV 477
                :|.|..|.|:
Mouse   538 FGEIIIDFIWITII 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 111/589 (19%)
Scnn1bNP_001258952.1 ENaC 21..621 CDD:273304 115/599 (19%)
deg-1 29..538 CDD:273309 109/582 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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