DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and Scnn1a

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_035454.2 Gene:Scnn1a / 20276 MGIID:101782 Length:700 Species:Mus musculus


Alignment Length:626 Identity:123/626 - (19%)
Similarity:195/626 - (31%) Gaps:260/626 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FVLYFNNCCIHGFRYLTDSMLILFEKFLWLILLIASI-----YFCIIVCLSSIDRYYTKSTHIGI 78
            |..:.||..|||...|..|.....:...|.:|.:.:.     .|.::     .:.|::....:.|
Mouse    85 FQFFCNNTTIHGAIRLVCSKHNRMKTAFWAVLWLCTFGMMYWQFALL-----FEEYFSYPVSLNI 144

  Fly    79 ERN---YIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQNI 140
            ..|   .:|     |:||||.::....|                    :..|:|           
Mouse   145 NLNSDKLVF-----PAVTVCTLNPYRYT--------------------EIKEDL----------- 173

  Fly   141 PQNEQIDQIIEDIGLKPEHYTELIYNL-TYDRTYEPNFNER---IRCMDGAMFIHVRQVLT---- 197
               |::|:|.|          :.:::| .|:.:|......|   .|.:.||:...::::.|    
Mouse   174 ---EELDRITE----------QTLFDLYKYNSSYTRQAGGRRRSTRDLRGALPHPLQRLRTPPPP 225

  Fly   198 -----------------------EW----GLCYLGNSK-LTEEYSSRYFIFGKYPEYNKYEYENI 234
                                   :|    .||....|. ..:.|||.   .....|:.::.|.||
Mouse   226 NPARSARSASSSVRDNNPQVDRKDWKIGFQLCNQNKSDCFYQTYSSG---VDAVREWYRFHYINI 287

  Fly   235 --RLPYQVGSFFQKDTQYAL----LGF--------KGPAIIA----FAHSAFEVMKVDSNSDYA- 280
              |||         ||..||    ||.        :.|...|    |.|..:......:|.:.: 
Mouse   288 LSRLP---------DTSPALEEEALGSFIFTCRFNQAPCNQANYSQFHHPMYGNCYTFNNKNNSN 343

  Fly   281 ---------YDGILYDLSTEE----------------ITAED----------NLEQ--DTTVAMR 308
                     .:|:...|.||:                :..:|          |:..  :|:::||
Mouse   344 LWMSSMPGVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVETSISMR 408

  Fly   309 R------------CRFPHESNLTHFPF-------YTRNICQQECRINLAYKICKCIPHFYPNRIA 354
            :            |    ..|.:..|.       ||:.:|...|......|.|.|...|||    
Mouse   409 KEALDSLGGNYGDC----TENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYP---- 465

  Fly   355 NPKPV--CDYKTLRS---C-FPHHASFFLKLYEENGKHENPAICY--CEQNCHDSVVTMKSMNPM 411
            .||.|  |||....|   | :...|:|.|   :..|       |:  |.:.|  ||...|     
Mouse   466 KPKGVEFCDYLKQSSWGYCYYKLQAAFSL---DSLG-------CFSKCRKPC--SVTNYK----- 513

  Fly   412 SGAKQLLGGIGSAVSVKT--WPQSRLRRQ----------------VIF--------------SLT 444
                 |..|.....|||:  |....|..|                :.|              ::.
Mouse   514 -----LSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYKTNSESPSVTMV 573

  Fly   445 DLLVSIGGTAGLFLGFSVLGFVEVIYFFTIRIVFQILGYTL 485
            .||.::|....|:.|.|||..||:     ..::|.:|..||
Mouse   574 SLLSNLGSQWSLWFGSSVLSVVEM-----AELIFDLLVITL 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 118/607 (19%)
Scnn1aNP_035454.2 ENaC 80..677 CDD:273304 123/626 (20%)
deg-1 88..600 CDD:273309 118/612 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.