DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic-2

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:528 Identity:110/528 - (20%)
Similarity:173/528 - (32%) Gaps:121/528 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NSKYRNGLKIVINYFVLYFNNCCIHGFRYLTDSMLILFEKFLWL-------ILLIASIYFCIIVC 62
            |:|......|.|..|||..       |.|   .:.||..||...       ||....|:..:.||
 Worm    29 NNKISRIFWIAIFLFVLGM-------FAY---ELYILIAKFFSYPATVNTEILFEKQIFPVVTVC 83

  Fly    63 LSSIDRYYTKSTHIGIERNYIF--WNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDF 125
            ..:..:|..      ::.|..|  .||.:.:.:...|...:...:..|..|        |..:|.
 Worm    84 NMNPYKYSV------VKSNSAFSSVNTLMTTYSDATVGTFSTDKWGLYADN--------DETYDL 134

  Fly   126 LENLANSTYINFQNIPQNEQIDQIIEDIGLKPEHYT--ELIYNLTYDRTYEPNFNERIRCMDGAM 188
            ....|::..:.          ..:|.|....|..||  :||.:.::         ..|.|.:...
 Worm   135 DSRAADALVLE----------ANLISDTAKVPALYTYADLIQDCSF---------AGIPCSESDF 180

  Fly   189 FIHVRQVLTEWGLCYLGNSKLTEEYS-SRYFI-FGKYPEYNKYEYENIRLPYQVGSFFQKDTQYA 251
            ...:..|   :|.||..|...:..|| ||..| ||            ::|...|..........:
 Worm   181 TKFIDPV---YGACYSFNEDASLNYSVSREGIQFG------------LKLMLTVTQTKTNGNTDS 230

  Fly   252 LLGFKGPAIIAFAHSAFEVMKVDSNSDYAYDGILYDLSTEEITAEDNLEQDTTVAMRRCRFPHES 316
            |...|........:|......:|||...|  |:.|: |...::...|:...........|.|..|
 Worm   231 LPTTKLAGARIGVNSRGSSPGLDSNGIDA--GVGYE-SAVSVSLTQNVRAKKPYGTCVDREPDSS 292

  Fly   317 NLTHFPFYTRNICQQECRINLAYKICKCIPHFYPNRIANPKPVCDYKTLRSCFPHHASF-FLKLY 380
            :......||...|...|:.......|:|         |||:.... .|..:|.|..|.. .|:..
 Worm   293 DYYKDFIYTLETCFNGCKQRDTIAKCQC---------ANPRLALG-STDTACQPIKADLDCLQTL 347

  Fly   381 EENGKHENPAI-----CYCEQNCHDSVVT---MKSMNPMSG---AKQLLGGIGSAVSV------- 427
            :.|.....|.|     |.|...|.:|..|   ..:..|.:.   |.....|:||..|.       
 Worm   348 KGNQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSSTAGVGSCSSTNSKFSSK 412

  Fly   428 ----KTWPQSRLRRQVI--------------FSLTDLLVSIGGTAGLFLGFSVLGFVEVIYFFTI 474
                |.:..:.:..||.              :::::::..:||.|||:||.||:..||:.....:
 Worm   413 SDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWLGLSVISVVEMTGLMLV 477

  Fly   475 RIVFQILG 482
            ...|.:.|
 Worm   478 MGAFCVTG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 101/498 (20%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 108/515 (21%)
ASC 13..471 CDD:279230 107/512 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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