DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and del-7

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_501276.4 Gene:del-7 / 183498 WormBaseID:WBGene00016699 Length:614 Species:Caenorhabditis elegans


Alignment Length:565 Identity:108/565 - (19%)
Similarity:177/565 - (31%) Gaps:214/565 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKYRNGLKIVINYFVLYFNNCC------IHGFRYLTDSML--ILFEKFLWLILLIASIYFCIIVC 62
            ::|...|||     ..:..||.      :||   |:..|:  .|..|..|.|:::|...:.|...
 Worm    45 TQYEEALKI-----AQFHCNCKYLWLRELHG---LSAFMMSNSLMSKVFWAIVIMACAGWSIGNT 101

  Fly    63 LSSIDRYYTKSTHIGIERNYIFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLE 127
            :|.:.:|..::|            |||  :|:.|..:|...... :|..|.          ||| 
 Worm   102 ISILKQYGDEAT------------TTL--LTILPTKQLKFPTMI-FCPRNP----------DFL- 140

  Fly   128 NLANSTYINFQNIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDRTYEPNFNERIRCMDGAMFIHV 192
                    |:.|         ::||:      |..|.|                  |:.....|:
 Worm   141 --------NYYN---------VLEDM------YNHLGY------------------MENTTNFHI 164

  Fly   193 RQ-VLTEWGLCYLGNSKLTEEYSSRYFIF-----GKYPEYNKYEYENIRLPYQVGSFFQK----- 246
            .| .:|.:|..........|.|..:..|:     |:..:|..:::...:..|.....||.     
 Worm   165 LQYAMTGFGFDNANGDTFNETYREQIHIYYLKWRGERTQYEMFDFMFNKNGYTCTDLFQTCYGGS 229

  Fly   247 ---------DTQYALLGFKGPAII--AFAHSAFEVMKVDSNSDYAYDGILYDLSTEEITAEDNLE 300
                     ...||:|..:...:|  .:.:...||.|:         .|.::..|..|.....|.
 Worm   230 QTYNCCDIFQPTYAMLRGRCFRLIDSYYQNDTDEVAKL---------SIFFNNMTSPILNTGVLP 285

  Fly   301 Q------DTTVAM-------------RRCRF--------PHESNLTHFPFY------------TR 326
            |      |:.|.:             .|.||        |.....:..|.|            .:
 Worm   286 QLVLYNGDSNVEIGIYPRYYLNSNDWNRVRFYQKSMILLPKSDGCSTDPIYQGKFTCFVYKWLMQ 350

  Fly   327 NICQQECRINLAYKICKCIPHF-YPNRIANPKPVCDYKTLRSCFPHHASFFLKLYEENGKHENPA 390
            .|.|..|          .:|:: |........|:|:...:.:.|            ||.......
 Worm   351 LIEQYNC----------TVPYYKYTLSYLKDVPICEPDVIVNNF------------ENISLTPST 393

  Fly   391 ICY-CEQNCH--DSVVTMKSMNPMSGAKQLLGGIGSAVSVKTWPQSRLRRQVIFSLTDL------ 446
            |.| |...|.  ::.||:                  |.|:.|.|......::..|.|.|      
 Worm   394 IGYKCTSACSRIENTVTL------------------ATSIDTDPDPSYMFRIEASFTYLEYEQYK 440

  Fly   447 ----------LVSIGGTAGLFLGFSVLGFVEVIYFFTIRIVFQIL 481
                      :..:||.||||:|.||:.||::.....|:| ::||
 Worm   441 EIRTTSTAGFISELGGQAGLFVGSSVMSFVQLFNSVFIQI-YKIL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 100/537 (19%)
del-7NP_501276.4 ASC <434..473 CDD:295594 12/38 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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