DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic1

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:536 Identity:106/536 - (19%)
Similarity:178/536 - (33%) Gaps:177/536 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IHGFRYLTDSMLILFEKF-----LWLILLIASIYFCIIVCLSSIDRYY-----TKSTHIGIERNY 82
            :||..:     :..:|:|     :|::..:.|:...:.||...|..|:     ||...|...| .
 Frog    26 LHGLAH-----IFTYERFSCRRLIWVLCFLGSLSLLLYVCTERIIYYFEYPHVTKLDEISTPR-M 84

  Fly    83 IFWNTTLPSVTVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQNIPQNEQID 147
            ||     |:||.|   .||...|:...:|:.....:       |.:|.|:.|    .:|.::..|
 Frog    85 IF-----PAVTFC---NLNEFRFSRVTKNDLYHAGE-------LLSLLNNRY----ELPDSQLAD 130

  Fly   148 QIIEDI--------GLKPEHYTELIYNLTYDRTYEPNFNERIRC--------MDGAMFIHVRQVL 196
            :.:.:|        ..||:.:....:   ||||........:.|        :|.  |:   .|.
 Frog   131 EKVMEILQDKANFRNFKPKPFNMREF---YDRTGHDIREMLLSCKYRGEECSVDD--FV---PVF 187

  Fly   197 TEWGLCYLGNSKLTEEYSSRYFIFGKYPEYNKYEYENIRLPYQVGSFFQKDTQYALLGFKGPAII 261
            |.:|.||..||             |:          |.|.|              |:..||.   
 Frog   188 TRYGKCYTFNS-------------GR----------NGRSP--------------LVTTKGG--- 212

  Fly   262 AFAHSAFEVM-------------KVDSNSDYAYDGILYDL-STEEITAEDNLEQDTTVAMRRCRF 312
              ..:..|:|             :.|..|..|  ||...: |.:|....|.|........:....
 Frog   213 --TGNGLELMLDIQQDEYLPVWGETDETSFEA--GIKVQIHSQDEPPFIDQLGFGVAPGFQTFVS 273

  Fly   313 PHESNLTHFP-----------------FYTRNICQQECRINLAYKICKCIPHFYPNRIANPKPVC 360
            ..|..||:.|                 .|:.:.|:.:|......:.|.|.....|...|    .|
 Frog   274 CQEQRLTYLPPPWGDCKSSAMDSEFFDTYSISACRIDCETRYLVENCNCRMVHMPGDAA----YC 334

  Fly   361 DYKTLRSCFPHHASFFLKLYEENGKHENPAICYCEQNC----HDSVVTMKSMNPMSGAKQL---- 417
            ..:..:.|......|.::  ::|.      .|.||..|    :...::|..:...:.|:.|    
 Frog   335 TPELYKECADPALDFLVE--KDND------FCVCETPCNMTRYGKELSMVKIPSKASARYLAKKY 391

  Fly   418 -------------LGGIGSAVSVKTWPQSRLRRQVIFSLTDLLVSIGGTAGLFLGFSVLGFVEVI 469
                         |.....|::.:|..|.:     .:.:..||..|||..|||:|.|:|..:|:.
 Frog   392 NKSEQYIAENILVLDIFFEALNYETIEQKK-----AYEVAGLLGDIGGQMGLFIGASILTVLELF 451

  Fly   470 YFFTIRIVFQILGYTL 485
            .:     .:::|.|.|
 Frog   452 DY-----AYEVLRYKL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 103/520 (20%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 106/536 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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