DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk10 and asic4

DIOPT Version :9

Sequence 1:NP_001033894.1 Gene:ppk10 / 3885617 FlyBaseID:FBgn0065110 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_031749131.1 Gene:asic4 / 100486325 XenbaseID:XB-GENE-940165 Length:535 Species:Xenopus tropicalis


Alignment Length:502 Identity:93/502 - (18%)
Similarity:169/502 - (33%) Gaps:142/502 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IHGFRYLTDSMLILFEKFLWLILLIASIYFCIIVCLSSIDRYYTKSTHIGIERNYIFWNTTLPSV 92
            :||.|::..:..:..::.||.:..:||:.| .:..::....||.:..|:......:......|::
 Frog    50 LHGLRHIFQTGRLGIKQSLWALAFLASLLF-FLYQVAKCALYYLEHPHVTAVDEEVMGEMIFPAI 113

  Fly    93 TVCPVDRLNITYFADYCRNNGIKGPQRDILWDFLENLANSTYINFQNIPQNEQIDQIIED----- 152
            |:|.::|.         |::.:..|.       :.:|||.|.:..::...:...|.:.:|     
 Frog   114 TICNINRF---------RHSALTDPD-------IYHLANLTGLPPKDREGHRDSDLMYDDPDMLD 162

  Fly   153 -IGLKPEHYTELI--YNLTYDRTYEPNFNERIRCMDGAMFIHVRQVLTEWGLCYLGNSKLTEEYS 214
             :........|::  .|.:.|.....||:               .|.|.:|.||..|:.......
 Frog   163 IVNRTGHQLAEMLKSCNFSGDSCSAQNFS---------------VVFTRYGKCYTFNADKKHPKV 212

  Fly   215 SRYFIFGK----------------YPEYNKYEYE-NIRLPYQVGSFFQKDTQYA-LLGF-KGPAI 260
            ||....|.                :.|.|:..:| .||:  |:.|  |.:..|. .:|| ..|..
 Frog   213 SRQGGMGNGLEIMLDIQQEEYLPIWRETNETSFEAGIRV--QIHS--QDEPPYIHQMGFGVSPGF 273

  Fly   261 IAFAHSAFEVMKVDSNSDYAYDGILYDLSTEEITAEDNLEQDTTVAMR---RCR--FPHESNLTH 320
            ..|....                                ||..|...:   .||  .|.|..|:.
 Frog   274 QTFVSCQ--------------------------------EQRMTYLPQPWGNCRSSIPGEEFLSG 306

  Fly   321 FPFYTRNICQQECRINLAYKICKC-IPHFYPNRIANPKPVCDYKTLRSCFPHHASFFLKLYEENG 384
            :..|:.:.|:.:|......:.|.| :.|...|     :.:|. ..:..|..|        ..:|.
 Frog   307 YSTYSISACRLQCEKEAVIRKCACRMVHMPGN-----ETICS-PVMYMCADH--------ILDNM 357

  Fly   385 KHENPAICYCEQNC----HDSVVTMKSMNPMSGAKQL-----------------LGGIGSAVSVK 428
            ..:....|.|...|    :...::|..:.....|:.|                 |.....|::.:
 Frog   358 VEDTSEKCSCPTPCNLTRYSKEISMVRIPNKGSARYLARKYNKNETYIRENFLVLDIFFEALNYE 422

  Fly   429 TWPQSRLRRQVIFSLTDLLVSIGGTAGLFLGFSVLGFVEVI-YFFTI 474
            |..|.:     .:.|..||..|||..|||:|.|.|..:|:: |.:.:
 Frog   423 TIEQKK-----AYDLPSLLGDIGGQMGLFIGASFLTILEILDYMYEV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk10NP_001033894.1 ASC 22..471 CDD:279230 92/497 (19%)
asic4XP_031749131.1 ASC 39..514 CDD:413546 93/502 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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