DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17140 and vdac3

DIOPT Version :9

Sequence 1:NP_001033896.1 Gene:CG17140 / 3885616 FlyBaseID:FBgn0260453 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_012814379.1 Gene:vdac3 / 496695 XenbaseID:XB-GENE-949888 Length:300 Species:Xenopus tropicalis


Alignment Length:306 Identity:66/306 - (21%)
Similarity:129/306 - (42%) Gaps:35/306 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 EIIPSPTSEGEMPTYFHVGALAKDCLINGFKIGAWQMHCSTRTDND-FYLNTFGEGYPTMKNVFG 134
            ::.|...:....|||..:|..|:|....|:..|..::...|::.:. ....:.|..........|
 Frog     9 DLQPGTVNMAVPPTYADLGKAARDVFNKGYGFGLVKLDLKTKSSSGVMEFTSSGSSNTDTGKASG 73

  Fly   135 GMEV---FKEVGNYSTSLGWFTNNDLLSEIAVRGMNFGSRLYGLLKSTIGTKDEVSF-------Q 189
            .:|.   .||.|...|. .|.|:|.|.:|:|:.     .:|...||.::.|    :|       .
 Frog    74 NLETKYKMKEAGVTFTQ-KWNTDNTLGTEVAIE-----DKLATGLKLSVDT----TFVPNTGKKS 128

  Fly   190 TKLKCGLERD--PVKVELVVPLYNEPLF----LGYVLVAPVENWVLGYRTEYNFDEKGFDKHALC 248
            .|||...:||  .|.:::.:.|....::    |||      :.|:.||:..::..:....::...
 Frog   129 AKLKTSYKRDHANVGIDIDLDLAGPTIYGWGVLGY------QGWLAGYQMAFDTAKSRLAQNNFA 187

  Fly   249 LGYNNGRTEVGLKLENFEDLRGSIFQRIGEAWAFAIKTNLYSSENVKQFAIGVQYDFQNGTMVKA 313
            |||..|..::...:.:..:..||::|::.:....::.....:..|..:|.||.:|...:||.:.|
 Frog   188 LGYTAGDFQLHTNVNDGTEFGGSVYQKVSKDVETSVSLAWSAGSNNTRFGIGAKYQLDSGTTLSA 252

  Fly   314 KLREDSRMGFVYQSKIGENIDVGYHLAFDGVDPIGGAHRIGVSWGF 359
            |:...|.:|..|...:...:.:......:|.:...|.|::|:  ||
 Frog   253 KVNNASLIGVGYTQTLRPGVKLTLSALINGKNFSAGGHKVGL--GF 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17140NP_001033896.1 Porin3_VDAC 82..360 CDD:132767 65/295 (22%)
vdac3XP_012814379.1 Porin3_VDAC 20..299 CDD:132767 65/295 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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