DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17140 and Vdac1

DIOPT Version :9

Sequence 1:NP_001033896.1 Gene:CG17140 / 3885616 FlyBaseID:FBgn0260453 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001349622.1 Gene:Vdac1 / 22333 MGIID:106919 Length:365 Species:Mus musculus


Alignment Length:293 Identity:65/293 - (22%)
Similarity:115/293 - (39%) Gaps:32/293 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PTYFHVGALAKDCLINGFKIGAWQMHCSTRTDNDFYLNTFGEGYPTMKNVFGGMEV---FKEVGN 144
            |||..:|..|:|....|:..|..::...|:::|.....:.|........|.|.:|.   :.|.|.
Mouse    87 PTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYGL 151

  Fly   145 YSTSLGWFTNNDLLSEIAV-----RG--MNFGSRLYGLLKSTIGTKDEVSFQTKLKCGLERDPVK 202
            ..|. .|.|:|.|.:||.|     ||  :.|.|.    .....|.|:     .|:|.|.:|:.:.
Mouse   152 TFTE-KWNTDNTLGTEITVEDQLARGLKLTFDSS----FSPNTGKKN-----AKIKTGYKREHIN 206

  Fly   203 V------ELVVPLYNEPLFLGYVLVAPVENWVLGYRTEYNFDEKGFDKHALCLGYNNGRTEVGLK 261
            :      ::..|.....|.|||      |.|:.||:..:...:....:....:||.....::...
Mouse   207 LGCDVDFDIAGPSIRGALVLGY------EGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTN 265

  Fly   262 LENFEDLRGSIFQRIGEAWAFAIKTNLYSSENVKQFAIGVQYDFQNGTMVKAKLREDSRMGFVYQ 326
            :.:..:..|||:|::.:....|:.....:..:..:|.|..:|.........||:...|.:|..|.
Mouse   266 VNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYT 330

  Fly   327 SKIGENIDVGYHLAFDGVDPIGGAHRIGVSWGF 359
            ..:...|.:......||.:...|.|::|:...|
Mouse   331 QTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17140NP_001033896.1 Porin3_VDAC 82..360 CDD:132767 65/293 (22%)
Vdac1NP_001349622.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11743
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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