DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk16 and scnn1b

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:635 Identity:134/635 - (21%)
Similarity:222/635 - (34%) Gaps:210/635 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HVQAQQMA---TTAIHRRSHPMHNHSHNPIQ--PQHRFRQIGEWFTENMRNYCQTTSLHGFSYIT 72
            ||:.:::.   |.|:||            ||  |.:.::::..||       |..|:.||...|.
 Frog     3 HVKMKRLKRYFTRALHR------------IQKGPGYTYKELLVWF-------CDNTNTHGPKRII 48

  Fly    73 RQDISRHERWFWLVVVILAIITSIVLVVVSWYWSQETPT-----VTVIESSHFPTWNIPFPAVTI 132
            ::...:...||        |:|.:...:|.|.|.....|     |:|..|..|.|  :.|||||:
 Frog    49 KEGPKKRVMWF--------ILTLVFAGLVFWQWGVLILTYLSYGVSVSLSIGFKT--MEFPAVTV 103

  Fly   133 CNFNKISKSKALSLLDQMQ--VPVGINRSELH-----NLF-------NLTLLPV----------- 172
            ||.|....|:...||..:.  |...::|.:..     |.|       |:||.|.           
 Frog   104 CNANPYKYSRVKPLLKDLDALVATALDRIQFSSQDQANTFTQSSTNQNVTLDPTLWNHIPLVVID 168

  Fly   173 DTMISN---DSLQKYDRILSLNNLTLNRLTQQLSPD---------CIEMISSCIWKGINTRCESL 225
            :|..||   :::...:.|.|.||...|....|.|..         |....:.|:::...:..::|
 Frog   169 ETDPSNPIVNNIFDNNAIYSKNNSFRNSSEDQTSYSQRYKVAMKLCTNNNTQCVYRNFTSGIQAL 233

  Fly   226 ---------------------------------------------FQRI-DTMEGQCCTFNYFGG 244
                                                         |.|| |...|.|..||:   
 Frog   234 QEWYLLQLSSIFSNVPLADRIAMGFKAEDLILTCLFGGQPCSYRNFTRIYDADYGNCYIFNW--- 295

  Fly   245 ISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDYYGTFFSGFGFRLLLHDAYNFP---- 305
                      .|..:.|......|...||.::|:....:|.....:....||:||...:||    
 Frog   296 ----------GQEGEDPMASANPGADFGLKLVLDIEQGEYLPYVQTTAAARLILHQQRSFPFVKD 350

  Fly   306 -----DENSETKVVTTTRESFVRINPESTYATNDIRRMDLSLRNCL--FGSEMTMHGLRRYSFIN 363
                 ...:||.:.....:   ..:.|:.|::..:...|:.::|..  |.|.        ||..:
 Frog   351 LGIYAMPGTETSIAVLVDQ---LEHMEAPYSSCTVNGSDIPVQNLYAEFNSS--------YSIQS 404

  Fly   364 CMFECRVRMTVDLCGCLP-PYVYNNGSYKVCGVLQTN--------CIIHSKRLFSHALANLNFSL 419
            |:..|.....|..|||.. .|...||| :.|    :|        |....:    .::|:....:
 Frog   405 CLRSCYQEQMVQTCGCADYQYPLPNGS-EYC----SNDKYPDWVPCYYGLR----DSVADRESCI 460

  Fly   420 SIVRETDSFPCGCLPDCQSNHYVSES---TTGRLD-----ISYFANRPTFNNATDR----ILLHV 472
            |:.::    ||.   |.|....:|.:   :.|..|     :||  .:.:.:|.|..    :.|::
 Frog   461 SLCQQ----PCN---DTQYKMVISMADWPSAGAQDWIFHVLSY--EKDSSHNITVNRNGIVRLNI 516

  Fly   473 FFSDLMSTRYR-------TDIFQNWLSALASFGGLLGLIMGFSIVTAFEF 515
            :|.:.   .||       |::.  ||  |::.||..|..||.|::...||
 Frog   517 YFQEF---NYRSITESEATNVV--WL--LSNLGGQFGFWMGGSVLCIIEF 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 125/599 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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