DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and asic1b

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_999956.1 Gene:asic1b / 407672 ZFINID:ZDB-GENE-040513-1 Length:557 Species:Danio rerio


Alignment Length:503 Identity:120/503 - (23%)
Similarity:189/503 - (37%) Gaps:134/503 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SLHGFSYITRQDISRHER-WFWLVVVILAIITSIVLVVVSWYWSQETPTVTVIESSHFPTWNIPF 127
            ||||.:::..:|.....| ..|.:|.:|||...::.||....:..:...||:::..:  ..|:.|
Zfish    74 SLHGANHVFVEDKKFSIRQGLWALVFLLAISMFLLQVVDRVIYYLQYDYVTLLDERN--AKNMTF 136

  Fly   128 PAVTICNFNKISKSKALSLLDQMQVPVGINRSELHNLFNLTLLPV-DTMISNDSL-QKYDRILSL 190
            ||:|:||:|...:|:             ::.|:|  ||...||.. |.|.....| .:.||..|.
Zfish   137 PAITLCNYNTFRRSQ-------------LSYSDL--LFMGPLLGYEDNMAPGIPLAPEPDRQGSR 186

  Fly   191 NNLT--LNRLTQQLSPDCIEMISSCIWKGINTRCESLFQRIDTMEGQCCTFNYFGGISNNFPEKI 253
            .:|.  .||...::.    :|:..|.:.|.....|. ::.|.|..|:|.|||  .|...      
Zfish   187 FSLAEFFNRTRHRMD----DMLLECNFAGKECGAEH-WREIFTRYGKCYTFN--SGQDG------ 238

  Fly   254 AYQVPKRPYRVT---GCGYPTGLSVLLNPMISDY---YG-----TFFSGFGFRLLLHDAYNFPDE 307
                  ||..:|   |.|  .||.::|:....:|   :|     ||.:|...::...|...|.|:
Zfish   239 ------RPLLITTKGGMG--NGLEIMLDIQQDEYLPVWGETDETTFEAGIKVQIHTQDEPPFIDQ 295

  Fly   308 -------NSETKVVTTTRESFVRINP-----ESTYATNDIRRMDLSLRNCLFGSEMTMHGLRRYS 360
                   ..:| .|:...:....:.|     ::|...:|.                    ...||
Zfish   296 LGFGVAPGFQT-FVSCQEQRLTYLPPPWGDCKATPIDSDF--------------------FNTYS 339

  Fly   361 FINCMFECRVRMTVDLCGC----LP---PYVYNNGSYKVCGVLQTNCIIHSKRLFSHALANLNFS 418
            ...|..:|..|..|:.|.|    :|   ||. ....||.|.                     :.:
Zfish   340 ITACRIDCETRYLVENCNCRMVHMPGDAPYC-TPEQYKECA---------------------DPA 382

  Fly   419 LSIVRETDSFPCGCLPDCQSNHYVSESTTGRL----DISYFANR--PTFNNATDRIL-LHVFFSD 476
            |..:.|.|:..|.|...|....|..|.:..|:    ...|.|.:  .|....:|.|: |.:||..
Zfish   383 LDFLVERDNDYCVCETPCNMTRYGKELSFVRIPSKASAKYLAKKYNKTEQYISDNIMVLDIFFEA 447

  Fly   477 LMSTRYRTDIFQNWLSALA----SFGGLLGLIMGFSIVT---AFEFIY 517
            |   .|.| |.|.....||    ..||.:||.:|.||:|   .|:::|
Zfish   448 L---NYET-IEQKKAYELAGLLGDIGGQMGLFIGASILTILELFDYLY 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
asic1bNP_999956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..57
ASC 66..548 CDD:295594 120/503 (24%)
Selectivity filter. /evidence=ECO:0000305 477..479 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.