DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and asic2

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_005164179.1 Gene:asic2 / 407669 ZFINID:ZDB-GENE-040513-4 Length:564 Species:Danio rerio


Alignment Length:545 Identity:132/545 - (24%)
Similarity:193/545 - (35%) Gaps:170/545 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TSLHGFSYITRQDISRHERWFWLVVVILAIITSIVLVVVSW------YWSQETPTVTVIESSHFP 121
            |.|||..:|.....|...|.||::    |..|.:.| ::||      :| ...||.|.:.:.   
Zfish    71 TRLHGLRHICSPSNSLSRRAFWMI----AFCTCLGL-LLSWSSNRLLHW-LAFPTHTRVHTE--- 126

  Fly   122 TW--NIPFPAVTICNFNKISKSKALSLLDQMQVPV---GINRSELH--------NLFNLTLLPVD 173
             |  .:.||.|||||.|                ||   .:.:|:|:        .|.|.|..|:.
Zfish   127 -WAKELAFPTVTICNNN----------------PVRLYHLTKSDLYFAGHWLGLLLANRTARPLV 174

  Fly   174 TMISNDSLQKYDRILSLNNLTL-------------NRLTQQLSPDCIEMISSCIWKGINTRCESL 225
            ..:..|..:.:...||...|.|             :||..||.    :|:.:|.::|......: 
Zfish   175 LDLLQDDRRGWFSKLSDFRLFLPPRRFEGTSLEFMDRLGHQLE----DMLLACKYRGEPCGAHN- 234

  Fly   226 FQRIDTMEGQCCTFNYFGGISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDY---YG- 286
            |..:.|..|:|..||             |.:..|........|...||.::|:....:|   :| 
Zfish   235 FSTVFTRYGKCYMFN-------------AAEEGKTLRTTMKGGTGNGLEIMLDIQQDEYLPVWGE 286

  Fly   287 ---TFFSGFGFRLLLHDAYNFPDENSETKVVTTTRESFVRINPESTYATNDIRRMDL-------- 340
               |.|.. |.|:.:|.....|..:.....|....::||        ||.:.|...|        
Zfish   287 TEETAFEA-GVRVQIHSQAEPPFVHELGFGVAPGFQTFV--------ATQEQRLTYLPPPWGECV 342

  Fly   341 --SLRNCLFGSEMTMHGLRRYSFINCMFECRVRMTVDLCGCLPPYVYNNG------SYKVC---- 393
              :|.:.||         :.||...|..||..|..|:.|.|...|:..:.      .||.|    
Zfish   343 SRALDSGLF---------QVYSVSACRIECETRYIVENCNCRMVYMPGDSPYCTPEQYKDCAEPA 398

  Fly   394 -----GVLQTNCIIHSKRLFSHALANLNFSLSIVRETDSFPCGCLPDCQSNHYVSESTTGRLDIS 453
                 .|..||||..|    ...:...|..||:|:         :|...|..|:.:.        
Zfish   399 LAALSAVEGTNCICRS----PCNMTRYNKELSMVK---------IPSKTSARYLEKK-------- 442

  Fly   454 YFANRPTFNNA----TDRIL-LHVFFSDLMSTRYRTDIFQ----NWLSALASFGGLLGLIMGFSI 509
                   ||.:    ||.|| |.|||..|   .|.| |.|    .....|...||.:||.:|.||
Zfish   443 -------FNRSEKYITDNILVLDVFFEAL---NYET-IEQKKAYEVAGLLGDIGGQMGLFIGASI 496

  Fly   510 VT---AFEFIYFLTFRPVFNYINRE 531
            :|   .|::.|.:....:.:.:|||
Zfish   497 LTLLELFDYAYEVVKERLLDLLNRE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
asic2XP_005164179.1 ASC 71..538 CDD:295594 132/545 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586631
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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