DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and asic-2

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:530 Identity:94/530 - (17%)
Similarity:190/530 - (35%) Gaps:126/530 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GEWFTENMRNYCQTTSLHGFSYITRQDISRHERWFWLVVVILAI---ITSIVLVVVSWYWSQETP 110
            |..|.:..:::...:::....::...: ::..|.||:.:.:..:   ...:.:::..::....|.
 Worm     3 GGGFVQIFKDFSNWSTVAVVPHVANAN-NKISRIFWIAIFLFVLGMFAYELYILIAKFFSYPATV 66

  Fly   111 TVTVIESSHFPTWNIPFPAVTICNFNK-----ISKSKALSLLDQM-----QVPVGINRSELHNLF 165
            ...::.....      ||.||:||.|.     :..:.|.|.::.:     ...||...::...|:
 Worm    67 NTEILFEKQI------FPVVTVCNMNPYKYSVVKSNSAFSSVNTLMTTYSDATVGTFSTDKWGLY 125

  Fly   166 NLTLLPVDTMISNDSLQKYD---RILSLNNLTLNRLTQQLSPDCI----EMISSCIWKGINTRC- 222
                      ..||  :.||   |......|..|.::.......:    ::|..|.:.||  .| 
 Worm   126 ----------ADND--ETYDLDSRAADALVLEANLISDTAKVPALYTYADLIQDCSFAGI--PCS 176

  Fly   223 ESLFQR-IDTMEGQCCTFNYFGGISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDYYG 286
            ||.|.: ||.:.|.|.:||....::               |.|:..|...||.::|....:...|
 Worm   177 ESDFTKFIDPVYGACYSFNEDASLN---------------YSVSREGIQFGLKLMLTVTQTKTNG 226

  Fly   287 TFFS-----GFGFRLLLHDAYNFP--DENS-------ETKVVTTTRESFVRINPESTYATNDIRR 337
            ...|     ..|.|:.::...:.|  |.|.       |:.|..:..::   :..:..|.|...|.
 Worm   227 NTDSLPTTKLAGARIGVNSRGSSPGLDSNGIDAGVGYESAVSVSLTQN---VRAKKPYGTCVDRE 288

  Fly   338 MDLS--LRNCLFGSEMTMHGLRRYSFINCMFECRVRMTVDLCGCLPPYVYNNGSYKVCGVLQT-- 398
            .|.|  .::.:            |:...|...|:.|.|:..|.|..|.:....:...|..::.  
 Worm   289 PDSSDYYKDFI------------YTLETCFNGCKQRDTIAKCQCANPRLALGSTDTACQPIKADL 341

  Fly   399 NCIIHSKRLFSHALANLNFSLSIVRETDSFPCGCLPDC---------------QSNHYVSESTTG 448
            :|:...|...:.:..|::..:.         |.|.|.|               .:::||:.|:|.
 Worm   342 DCLQTLKGNQTSSTPNIDLLVE---------CNCNPPCDESTYTPTVSLAQFPSTSYYVATSSTA 397

  Fly   449 RLDI-----SYFANRPT----FNNATDRILLHVFFSDLMSTRYRTDIFQNWLSALASFGGLLGLI 504
            .:..     |.|:::..    :||  :.:::.||...|....|.........:.:...||..||.
 Worm   398 GVGSCSSTNSKFSSKSDCQKWYNN--NGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLW 460

  Fly   505 MGFSIVTAFE 514
            :|.|:::..|
 Worm   461 LGLSVISVVE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
asic-2NP_492099.1 deg-1 12..474 CDD:273309 92/521 (18%)
ASC 13..471 CDD:279230 92/520 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

Return to query results.
Submit another query.