DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and acd-4

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_505230.1 Gene:acd-4 / 185036 WormBaseID:WBGene00017879 Length:613 Species:Caenorhabditis elegans


Alignment Length:523 Identity:125/523 - (23%)
Similarity:215/523 - (41%) Gaps:89/523 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PIQPQHRFRQIGEWFTENMRNYCQTTSLHGFSYITRQD-------ISRHERWFWLVVV--ILAII 93
            |:....:.|:     ||.:.:..|.|. | ||.||..:       ..|..:.||::||  |||.:
 Worm    16 PVDSVKKLRK-----TEGVGSVYQETQ-H-FSTITTVNGPRRIFYGKRSAQIFWILVVISILAFL 73

  Fly    94 TSIVLVVVSWYWSQETPTVTVIESSHFPT--WNIPFPAVTICNFN--------KISKSKALS--L 146
            ...:::::.:::|:  ||::.|   :|.|  ..:.||:||:||.|        |::.|..||  |
 Worm    74 VYQIVILIQYFYSK--PTLSQI---NFITNEGAVYFPSVTVCNLNPVKTSFIKKLNSSGDLSEEL 133

  Fly   147 LDQMQVPVGINRSELH-----NLFNLTLLPVDTMISNDSLQKYDRILSLNNLTLNRLTQQLSPDC 206
            |:.:   :....:.::     |:|.|....::.::...:...::.:..||:...         ||
 Worm   134 LNYL---LATKTNSMYMFNNANIFELKRAHLNALVYLANHPDFEIVNFLNSAQF---------DC 186

  Fly   207 IEMISSCIWKGINTRCESLFQRIDTMEGQCCTFNYFGGISNNFPEKIAYQVPKRPYRVTGCGYPT 271
            .|:..:|.:.|....|.....:..|..|:|...|    :.|   |..|:...|..   :|....|
 Worm   187 DELFETCFYGGKQFNCCKYMTQSITSLGRCWELN----LRN---ETDAWLTKKGR---SGTSPKT 241

  Fly   272 GLSVLLNPMISDYYGTF-FSGF---GFRLLLHDAYNFPDENSETKVVTTTRESFVRINPESTYAT 332
            ||.::.|...|:.:..| :|.|   |||..:|..:..||..:|...|:.:|.    :|.......
 Worm   242 GLQIIANARQSEQFINFHYSSFQENGFRYFIHPPHVSPDLAAEGITVSPSRV----VNSAIKTVL 302

  Fly   333 NDIRRMDLSLRNCLFGSEMTMHGLRRYSFINCMFECRVRMTVDLCGCLPPYVYN-NGSYKVCGVL 396
            :|:...: :..||........:....||...|...|.......|||| .||.|| :.:.:||  |
 Worm   303 HDLLNHE-NWGNCTSSWPEHYNTNLPYSSSACQALCVSNYFKKLCGC-SPYSYNIDNNTQVC--L 363

  Fly   397 QTNCIIHSKRLFSHALANLNFSLSIVRETDSFP-CG-CLPDCQSNHYVSESTTG---RLDISYFA 456
            ....:|......:.:.:|...||       .|| |. |...||...|.|.::.|   ..:...:.
 Worm   364 PYEEVICMMEKMTKSDSNGTVSL-------DFPFCAECHLACQKTSYSSYTSYGDGFNYNSMKWL 421

  Fly   457 NRPTFNNAT----DRILLHVFFSDLMSTRYRTDIFQNWLSALASFGGLLGLIMGFSIVTAFEFIY 517
            .|.|..:|:    :..::::.|.:|..|.|........|:......||.||..|.|:|:..|.|.
 Worm   422 TRETNRSASYIRQNIAIINIHFMELFYTSYSQVKATTILNTFNKIFGLNGLWFGMSVVSLTELIL 486

  Fly   518 FLT 520
            :.|
 Worm   487 YFT 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
acd-4NP_505230.1 ASC 39..487 CDD:279230 117/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162318
Domainoid 1 1.000 94 1.000 Domainoid score I4697
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I3586
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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