DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and del-9

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:504 Identity:108/504 - (21%)
Similarity:187/504 - (37%) Gaps:132/504 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QTTSLHGFSYITRQDISRHERWFWLVVVILAIIT------------SIVLVVVSWYWSQETPTVT 113
            :|::|||...:......| .|..|:::||||:..            |:..:||| |:.||..::.
 Worm    85 ETSTLHGLRDVMLSSSGR-LRMVWVLIVILALFMTFQGCYQIMDEYSMRRIVVS-YFIQEAQSIW 147

  Fly   114 VIESSHFPTWNIPFPAVTICNFNKISKSKALSLLDQMQVPVGINRSELHNLFNLTLLPVDTMISN 178
            |             |.|.:|.:|::::    |.::...|..     ||.....|:...:|....|
 Worm   148 V-------------PDVVVCPYNRLNR----SFIEANNVSF-----ELAQFLELSFPSMDLPFEN 190

  Fly   179 ------DSLQKYDR-------ILSLNNLTLNRLTQQLSPDCIEMISSCIWKGINTRCESLFQRID 230
                  :.:.|.|.       :|..||:|..:..::.|.:|......      :.||.:..: |.
 Worm   191 IQQQQEEIISKIDTLDFQIEILLEQNNMTYAQFLRKASLNCEAFFED------SRRCANTTE-IM 248

  Fly   231 TMEGQCCTFNYFG------GISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDYYGTFF 289
            |..|:|  |...|      |..|.  ::....:|:..|.       .|::.::|           
 Worm   249 TSAGKC--FRMAGIKQEIAGFGNG--DRYVIDLPEEYYN-------PGINQMIN----------- 291

  Fly   290 SGFGFRL------LLHDAYNFPDENSETKVVTTTRESFVRINPESTYATNDIRRMDLSLRNCLFG 348
            ||...:|      :.:|....|........:..|:..|:          ||..|.:     |   
 Worm   292 SGVIIKLAERGQGIDNDLTFLPAGVHAIMPLLGTQFEFM----------NDPPRYE-----C--- 338

  Fly   349 SEMTMHGLRRYSFINCMFECRVRMTVD---LCGCLPPYVYNNGSY--KVCGVLQT-NCIIHSKRL 407
             |...||  .||.::|..:|   :|:|   .|.| .|....|.:|  |:|...|. :|..  .:|
 Worm   339 -EEDPHG--NYSRVHCFEDC---LTLDAQQTCQC-SPAAAQNPAYPDKLCTATQLYHCFF--TKL 394

  Fly   408 FSHALANLNFSLSIVRETDSFPCGCLPDCQS---NHYVSESTTGRLDISYFANRPTFNNATDRIL 469
            |..   :.|.|.:||   |:....|...|.:   |..||.|:...........|..:.....:|:
 Worm   395 FPE---DSNLSKAIV---DACKKECKAPCHAWNYNKQVSYSSIPSEASKKLLPREEWEKMKRKII 453

  Fly   470 LHVFFSDLMSTRYRTDIFQNWLSALASFGGLLGLIMGFSIVTAFEFIYF 518
            |.:::|:|..|..:..|.....|.:|..||...|..|.|:::..:.:.:
 Worm   454 LDIYYSELDYTIIKHVIAMPLSSLIAQIGGQFSLFAGGSLISLCQIVIY 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
del-9NP_508622.2 ASC 85..502 CDD:307141 108/502 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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