DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and del-1

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001355359.1 Gene:del-1 / 181534 WormBaseID:WBGene00000952 Length:694 Species:Caenorhabditis elegans


Alignment Length:710 Identity:121/710 - (17%)
Similarity:218/710 - (30%) Gaps:278/710 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QMATTAIHRRSHPMHNHSHNPI----QPQHRFRQIGEWFTE---------------NMRNYCQTT 63
            ::.|..:.||:...:..:...:    :.:.:.:.:|:.|.:               ::|::|:.|
 Worm    16 RILTPRLLRRNEERYRETEALVKKFKKKEEKEKDVGKSFEDDSPCKEEAPKTQIQHSVRDFCEQT 80

  Fly    64 SLHGFSYITRQDISRHERWFWLVVVILAIITSIVLVVVSWY--------WSQETPTVT---VIES 117
            :.||.:.|....:      :|  |..|.::.|:|.:.:..|        :.::...|.   |.||
 Worm    81 TFHGVNMIFTTSL------YW--VRFLWVVVSLVCICLCMYSFSHVKDKYDRKEKIVNVELVFES 137

  Fly   118 SHFPTWNIPFPAVTICNFNKISKSKALSL------LDQMQVPV------------GINRSELHNL 164
            :       ||||:|:||.|......|.|:      ||.....|            |..|..|::.
 Worm   138 A-------PFPAITVCNLNPFKNHLARSVPEISETLDAFHQAVVYSNDATMDELSGRGRRSLNDG 195

  Fly   165 FNLTLLPVDTMIS----------------------NDSLQKYDR--------------------- 186
            .:...|..:.:.|                      |..:..|||                     
 Worm   196 PSFKYLQYEPVYSDCSCVPGRQECIAQTSAPRTLENACICNYDRHDGSAWPCYSAQTWEKSICPE 260

  Fly   187 -----ILSLNNLT----------------------------------------------LNRLTQ 200
                 ..::.|.|                                              :.:|||
 Worm   261 CNDIGFCNVPNTTGSGNIPCYCQLEMGYCVFQPESRVRRIWEFQGNKIPEKGSPLRKEYMEQLTQ 325

  Fly   201 --------------QLSPDCI-------------------EMISSCIWKGINTRCESLFQ-RIDT 231
                          |.....|                   |:|..|.:.|.....::.|: .||.
 Worm   326 LGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQQCNIDTEFKLHIDP 390

  Fly   232 MEGQCCTFNYFGGISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDYYGTFFSGFGFRL 296
            ..|.|.|||     :|          |::....:..|...||.:::....|||..| ....|.|:
 Worm   391 SFGNCYTFN-----AN----------PEKKLASSRAGPSYGLRLMMFVNSSDYLPT-TEATGVRI 439

  Fly   297 LLH--DAYNFPDE---NSETKVVTTTRESFVRINPESTYATNDIRRMDLSLRNCLFGSEMTMHGL 356
            .:|  :...|||.   ::.|.|:::...|...||           |:.....|||.........:
 Worm   440 AIHGKEECPFPDTFGYSAPTGVISSFGISLRNIN-----------RLPQPYGNCLQKDNPQSRSI 493

  Fly   357 ---RRYSFINCMFECRVRMTVDLCGCLPPYV---YNNGSYKVCGVLQT---NCI------IHSKR 406
               .:|....|...|.....:..|||..|..   :...::  |....|   ||:      :.:|.
 Worm   494 YKGYKYEPEGCFRSCYQYRIIAKCGCADPRYPKPWKRSAW--CDSTNTTTLNCLTTEGAKLSTKE 556

  Fly   407 LFSHALANLNFSLSIVRETDSFPCGCLPDCQSNHYVSEST-----TGRLDISYFANRPTFNNATD 466
            ...|                   |.|:..||.:.|.:..:     :|.:..|      ..|::.|
 Worm   557 NQKH-------------------CKCIQPCQQDQYTTTYSAAKWPSGSIQTS------CDNHSKD 596

  Fly   467 --------RILLHVFFSDLMSTRYRTDIFQNWLSALASFGGLLGLIMGFSIVTAFEFIYF 518
                    ..::.:::..:.....|.....:|.:.:|..||..||.:|.||::..||::|
 Worm   597 CNSYLREHAAMIEIYYEQMSYEILRESESYSWFNLMADMGGQAGLFLGASIMSVIEFLFF 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
del-1NP_001355359.1 deg-1 75..656 CDD:273309 114/649 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

Return to query results.
Submit another query.