DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and mec-10

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_509438.1 Gene:mec-10 / 181101 WormBaseID:WBGene00003174 Length:724 Species:Caenorhabditis elegans


Alignment Length:685 Identity:131/685 - (19%)
Similarity:208/685 - (30%) Gaps:259/685 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FRQIGEWFTENMRNYCQTTSLHGFSYITRQDISRHE-RW-FWLVVVILAIITSIVLVVVSWYWSQ 107
            :|:...|   :::.:|..||.||...:.:...|.:. .| |.|::..:..|...|.|:..:   |
 Worm    89 YRERIRW---HLQQFCYKTSSHGIPMLGQAPNSLYRAAWVFLLLICAIQFINQAVAVIQKY---Q 147

  Fly   108 ETPTVTVIESSHFPTWNIPFPAVTICNFNKI---------SKSKALSLLDQMQVPVGINRSELHN 163
            :...:|.|:.. |.|  .||||:|:||.|..         |.||.|.:...:....|.:.||   
 Worm   148 KMDKITDIQLK-FDT--APFPAITLCNLNPYKDSVIRSHDSISKILGVFKSVMKKAGDSSSE--- 206

  Fly   164 LFNLTLLPVDTMISNDSLQKYDRILSLNNLTL--------------------------------- 195
                       .:..:...:||    :|.:|:                                 
 Worm   207 -----------ALEEEEETEYD----MNGITIQAKRKKRGAGEKGTFEPANSACECDEEDGSNEC 256

  Fly   196 -NRLTQQLSPD---CI---EMISSCIW------KGINTRCESL---------------------- 225
             .|.|::.|.|   ||   :..::..|      :..||.|::.                      
 Worm   257 EERSTEKPSGDNDMCICAFDRQTNDAWPCHRKEQWTNTTCQTCDEHYLCSKKAKKGTKRSELKKE 321

  Fly   226 --------------------------------FQRIDTMEGQC---------------------- 236
                                            |..|.|.|.:.                      
 Worm   322 PCICESKGLFCIKHEHAAMVLNLWEYFGDSEDFSEISTEEREALGFGNMTDEVAIVTKAKENIIF 386

  Fly   237 -----------------------CTFN----------------YFGGISNNFPEKIAYQVPKRPY 262
                                   |:||                .||   |.|......::.|...
 Worm   387 AMSALSEEQRILMSQAKHNLIHKCSFNGKPCDIDQDFELVADPTFG---NCFVFNHDREIFKSSV 448

  Fly   263 RVTGCGYPTGLSVLLNPMISDYYGTFFSGFGFRLLLHDAYNFPDENSETKVVTTTRESFVRINPE 327
            |   .|...||.|:|....|||..| ....|.||.:||..:||           ..::|....|.
 Worm   449 R---AGPQYGLRVMLFVNASDYLPT-SEAVGIRLTIHDKDDFP-----------FPDTFGYSAPT 498

  Fly   328 STYATNDIRRMDLSLRNCLFG--------SEMTMHGLRRYSFINCMFECRVRMTVDLCGCLPPYV 384
            ...::..:|...:|.....:|        |.....|. .||...|...|...:.:|.|||..|..
 Worm   499 GYISSFGMRMKKMSRLPAPYGDCVEDGATSNYIYKGY-AYSTEGCYRTCFQELIIDRCGCSDPRF 562

  Fly   385 YNNGSYKVCGVLQTNCIIHSKRL--FSHALANLNFSLSIVRETDSFPCGCLPDCQSNHYVSEST- 446
            .:.|..:.|.|...|   |.:.|  .:|.:..::         .||.|.|...|....|.:..: 
 Worm   563 PSIGGVQPCQVFNKN---HRECLEKHTHQIGEIH---------GSFKCRCQQPCNQTIYTTSYSE 615

  Fly   447 ----TGRLDISY--------FANRPTFNNATDRILLHVFFSDLMSTRYRTDIFQNWLSALASFGG 499
                :..|:||.        ..|.....||.   :|.||:..|.............:..:|.|||
 Worm   616 AIWPSQALNISLGQCEKEAEECNEEYKENAA---MLEVFYEALNFEVLSESEAYGIVKMMADFGG 677

  Fly   500 LLGLIMGFSIVTAFEFI---YFLTFRPVFNYINRE 531
            .|||..|.|::|..||:   :.|.:..:.::||::
 Worm   678 HLGLWSGVSVMTCCEFVCLAFELIYMAIAHHINQQ 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
mec-10NP_509438.1 ASC 88..723 CDD:295594 131/685 (19%)
deg-1 99..696 CDD:273309 126/654 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162364
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.640

Return to query results.
Submit another query.