DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and unc-8

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001294293.1 Gene:unc-8 / 177494 WormBaseID:WBGene00006748 Length:778 Species:Caenorhabditis elegans


Alignment Length:684 Identity:122/684 - (17%)
Similarity:198/684 - (28%) Gaps:294/684 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WFTENMRNYCQTTSLHGFSYITRQDISRHERWFWLVVVILAIITSIVLVVVSWYWSQETPTVTVI 115
            ||     ::|..||.||..|:...  |...|:.|..:.:..::.  .|:...|..|:.....|:|
 Worm   105 WF-----DFCARTSSHGIPYVATS--SFFGRYVWAALFMCMLMA--FLLQTYWTMSEYLQYRTII 160

  Fly   116 ESS-HFPTWNIPFPAVTICNFNKISKSK-------------------ALSLLDQMQ--------V 152
            |.. .|..  ..|||.|:||.|....|:                   |..:.|.|:        :
 Worm   161 EMQLQFEA--AAFPAATVCNLNAFKYSELTQYEEIKEGFDYWERVINARMMSDSMKPGGDILEAI 223

  Fly   153 PVGINRSELHNLFNLTLLPVD-------------------------------------------- 173
            .|...||:..:..   |.|:|                                            
 Worm   224 SVRKKRSKSRDQL---LFPIDDEDLEGAVYQPVFVRCTCMNMEQCVPNRNPLEVNASICMCFEDV 285

  Fly   174 ---------------------TMISN-----------DSLQKYD--------------------- 185
                                 ..|||           ..:.|::                     
 Worm   286 TRGLIWPCYPTSVWTVKKCSGCSISNTCPDPDGPNASKQIAKHNSPLPCLCQSISHHCMVHPKDE 350

  Fly   186 -RILSLNNLTLNRLTQ---------------------------------------------QLSP 204
             |..:.||.|:..:|:                                             .||.
 Worm   351 IRWWNPNNYTVYSVTEPPTTEITETEEAFGLSDLKDAGAITTQTKENLIFLVAALPRETRRNLSY 415

  Fly   205 DCIEMISSCIWKGINTRCESLFQ-RIDTMEGQCCTFNYFGGISNNFPEKIAYQVPKRPYRVTGCG 268
            ...|.:..|.:...:...|..|: .:|...|.|.|||:...:.               .:.:..|
 Worm   416 TLNEFVLRCSFNSKDCSMERDFKLHVDPEYGNCYTFNFNDSVE---------------LKNSRAG 465

  Fly   269 YPTGLSVLLNPMISDYYGTFFSGFGFRLLLH--DAYNFPDE---NSETKVVTTTRESFVRINPES 328
            ...||.:|||...|||..| ....|.||::|  |...|||.   ::.|..::    ||       
 Worm   466 PMYGLRLLLNVHQSDYMPT-TEAAGVRLVVHEQDQEPFPDTFGYSAPTGFIS----SF------- 518

  Fly   329 TYATNDIRRMDLSLRNC---------LFGSEMTMHGLRRYSFINCMFECRVRMTVDLCGCLPP-Y 383
            ...|.::.|:.....||         ::....:..|..|    || |:.:|   :::|||..| :
 Worm   519 GLKTKELHRLSAPWGNCSDTFRPVPYIYNEHYSPEGCHR----NC-FQLKV---LEICGCGDPRF 575

  Fly   384 VYNNGSYKVCGVLQTNCIIHSKRLFSHALANLNFSLSIVRETDS-------FPCGCLPDCQSNHY 441
            ...:..::.|..        ..::....|:||.        :||       ..|.|...|....:
 Worm   576 PLPSEEHRHCNA--------KSKIDRQCLSNLT--------SDSGGYHHLHEQCECRQPCHEKVF 624

  Fly   442 VSESTTGRLDISYFAN---RPTFNNATDRILLHVFFSDL--------MSTRYRTDIFQNWL---- 491
                     :.:|.|:   ...|...||...:...|:|.        .:|.| .:|:...|    
 Worm   625 ---------ETAYSASAWPSQNFKIGTDCPAVSDIFNDTEACTEYYRQNTAY-IEIYYEQLNFES 679

  Fly   492 ----------SALASFGGLLGLIMGFSIVTAFEF 515
                      :..:.|||.:||.:|||::|..||
 Worm   680 LKETAGYTLVNLFSDFGGNIGLWIGFSVITFAEF 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
unc-8NP_001294293.1 ASC 100..719 CDD:295594 122/684 (18%)
deg-1 107..716 CDD:273309 120/677 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.