DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk16 and scnn1d

DIOPT Version :9

Sequence 1:NP_001334673.1 Gene:ppk16 / 3885612 FlyBaseID:FBgn0065108 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_031762206.1 Gene:scnn1d / 100496702 XenbaseID:XB-GENE-991876 Length:604 Species:Xenopus tropicalis


Alignment Length:602 Identity:113/602 - (18%)
Similarity:198/602 - (32%) Gaps:234/602 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 FTENMRNYCQTTSLHGFSYITRQDISRHERW---FWLVVVILAIITSIVLVVVSW--------YW 105
            |.:.::.:|..|::||   ..|.:.||..:.   ||||:..:|      ..::.|        ||
 Frog    19 FEDMLKFFCDNTTIHG---TVRLNCSRENKMKTTFWLVLYFVA------FAMMYWQFGQLTDQYW 74

  Fly   106 SQETPTVTVIESSHFPTWNIPFPAVTICNFNKISKSKA---LSLLDQMQVPVGINRSELHNLFNL 167
            :..|.|:..::|.     ...||||||||.|.....:.   ::.|||:.      :..|:.|:..
 Frog    75 AYPTNTIIGLQSK-----GKIFPAVTICNLNPYRFDQVNMYINQLDQLA------KETLYLLYEY 128

  Fly   168 ---------TLLPVDTMISNDSLQKYDRILSLNNLTLNRLTQ--------------------QLS 203
                     .::.:..:::|.:.|.....:...::.|.:|.:                    ..|
 Frog   129 EYEVPESPQQVVDLQDLLNNVTGQFNGNFILDQSIVLQKLQENGSGPALPGQKKFKVGFKLCNSS 193

  Fly   204 PDCIEMISSCIWKGINTRCE-SLFQRIDTMEG----------------QCCTFN----------- 240
            .||   .....|.|.:...| ..|..|:.|..                ..|.||           
 Frog   194 GDC---YYKWFWSGFDAVHEWYKFHYINIMSNIPAVLNIANNFSRDYILTCHFNEMPCDEREYVH 255

  Fly   241 ----YFGG---ISNNFPEKIAYQVPKRPYRVTGCGYPTGLSVLLNPMISDYYGTFFSGFGFRLLL 298
                .:|.   |:|::.|...|.  .||      |...|||:::...:.|.........|.|:::
 Frog   256 FHHPIYGNCFTINNHWKENSWYS--SRP------GKQYGLSIVVKTDLHDNMPLLSQAAGARIMI 312

  Fly   299 HDAYNFP------------DENSETKVVTTTRESFVRINPESTYATNDIRRMDLSLRNCLFGSEM 351
            |:....|            .|||    ::..:|..:|:..:.:..|:|  ..||.:: .|:.:..
 Frog   313 HNPNQPPLVEHQGFDIRPGTENS----ISVKQEEAIRLGGKYSQCTSD--GSDLGIK-ILYNTSY 370

  Fly   352 TMHGLRRYSFINCMFECRVRMTVDLCGC------LPPYVYNNGSYKVCGVLQTNCIIHS------ 404
            ||..        |:..|.....:::|||      |||           |:...|...|.      
 Frog   371 TMQA--------CLNSCFQYKMIEVCGCGYYFYPLPP-----------GMEYCNYNKHPDWGYCF 416

  Fly   405 ----KRLFSHALANLNFSLSIVRETDSFPCGCLPDC-----QSNHYVS----------------- 443
                :::..|.|.                  |...|     |:.:::|                 
 Frog   417 YQLYEKMLDHTLI------------------CFTQCPKQCKQTEYHLSAGTAKWPSPVSKAKKLL 463

  Fly   444 ------ESTTGRLDISYFANRPTFNNATDRILLHVFFSDLMSTRYRT-----DIFQNWLSALASF 497
                  .||:.|.|||               .::|::.:|   .||:     .:....|  |:|.
 Frog   464 SLQERYNSTSKRSDIS---------------KINVYYEEL---SYRSVEETPSVSVTML--LSSM 508

  Fly   498 GGLLGLIMGFSIVTAFE 514
            |||.....|.|:::..|
 Frog   509 GGLWSWWFGSSVLSVAE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk16NP_001334673.1 None
scnn1dXP_031762206.1 ENaC 18..583 CDD:273304 113/602 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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