DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Megf11

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_038938374.1 Gene:Megf11 / 691517 RGDID:1582797 Length:1139 Species:Rattus norvegicus


Alignment Length:63 Identity:23/63 - (36%)
Similarity:33/63 - (52%) Gaps:6/63 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ICYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECECAPGY 110
            |.|:|.....:....|.|  |.||.||...|..    |.|:|:|:|.:|.|::|:.|.|.||:
  Rat    68 ISYKTAYRRGLRTMYRRR--SQCCPGYYENGDF----CIPLCTEECMHGRCVSPDTCHCEPGW 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 19/56 (34%)
Megf11XP_038938374.1 EMI 25..94 CDD:462204 10/27 (37%)
EGF_CA 189..234 CDD:473889
Laminin_EGF 275..320 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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