DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and pear1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:118 Identity:33/118 - (27%)
Similarity:51/118 - (43%) Gaps:25/118 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ICGLGIELPTR--TAAQFWS----------VDPVTQWRKEALAERGSG-------ICYRTLTVET 57
            :|.|.:.|..|  .....|.          ..|..|..:|..:|..|.       |.|:||..:.
Zfish    16 VCELSLSLDPRDPNVCSLWESFTTSVKESYAQPFDQMSEEPCSEPWSANKCTRHRITYKTLYRQV 80

  Fly    58 INPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECECAPGY 110
            :..:.|.|.  .||.|:..   |:| ||.|.|:::|.:|.|:||:.|:|..|:
Zfish    81 VKMDYRRRY--QCCPGFYE---SRN-KCVPRCTKECVHGRCVAPDRCQCEMGW 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 20/56 (36%)
pear1XP_700533.4 EMI 28..97 CDD:462204 15/70 (21%)
Laminin_EGF 411..451 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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