DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and stab1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001182543.1 Gene:stab1 / 570626 ZFINID:ZDB-GENE-050208-554 Length:2553 Species:Danio rerio


Alignment Length:50 Identity:14/50 - (28%)
Similarity:25/50 - (50%) Gaps:1/50 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YCCDGYVNKGTSQNLKCEPICSEDCS-NGLCLAPEECECAPGYYRSNKRC 117
            :|.:|::.:.....::.:.|||..|. |.:||...:|||...|..:...|
Zfish  2030 FCQEGWMGESCQTAIEVKSICSPACDLNAVCLPENQCECLEPYEGNGINC 2079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 10/37 (27%)
stab1NP_001182543.1 EGF_3 227..257 CDD:463759
FAS1 <377..475 CDD:441906
FAS1 491..630 CDD:441906
EGF_3 819..847 CDD:463759
EGF_3 859..889 CDD:463759
EGF_3 901..932 CDD:463759
EGF_3 938..974 CDD:463759
Fasciclin 1002..1103 CDD:396845
Fasciclin 1125..1242 CDD:470649
EGF_3 1458..1494 CDD:463759
EGF_3 1500..1536 CDD:463759
EGF_3 1542..1578 CDD:463759
Fasciclin 1611..1711 CDD:396845
Fasciclin 1734..1864 CDD:396845
EGF_3 2085..2120 CDD:463759
EGF_3 2128..2163 CDD:463759
Link_domain_TSG_6_like 2198..2290 CDD:239592
Fasciclin 2322..2448 CDD:470649
Blue background indicates that the domain is not in the aligned region.

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