DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and STAB2

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_060034.9 Gene:STAB2 / 55576 HGNCID:18629 Length:2551 Species:Homo sapiens


Alignment Length:72 Identity:20/72 - (27%)
Similarity:25/72 - (34%) Gaps:26/72 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 CCDGYVNKGTSQNLKCE-------PICSE---DCSNGLCLAPE--------------ECECAPGY 110
            |..|..|.|...:..||       |.|.:   :|:..||  ||              ||:|.|.|
Human   166 CVHGVCNSGLDGDGTCECYSAYTGPKCDKPIPECAALLC--PENSRCSPSTEDENKLECKCLPNY 228

  Fly   111 YRSNKRC 117
            ....|.|
Human   229 RGDGKYC 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 15/59 (25%)
STAB2NP_060034.9 EGF_3 246..275 CDD:463759
EGF_3 326..361 CDD:463759
Fasciclin 382..505 CDD:396845
Fasciclin 526..654 CDD:396845
EGF_3 837..865 CDD:463759
EGF_3 876..908 CDD:463759
EGF_3 920..951 CDD:463759
EGF_3 957..993 CDD:463759
Fasciclin 1009..1129 CDD:396845
Fasciclin 1148..1265 CDD:396845
EGF_3 1437..1469 CDD:463759
EGF_3 1475..1511 CDD:463759
EGF_3 1517..1553 CDD:463759
EGF_3 1559..1595 CDD:463759
Fasciclin 1617..1726 CDD:396845
Fasciclin 1752..1882 CDD:396845
EGF_3 2086..2121 CDD:463759
EGF_3 2127..2164 CDD:463759
Link_domain_TSG_6_like 2198..2290 CDD:239592
FAS1 2356..2449 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000269|PubMed:18519035 2504..2514
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2512..2551
Blue background indicates that the domain is not in the aligned region.

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