DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Scarf1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001004157.2 Gene:Scarf1 / 380713 MGIID:2449455 Length:820 Species:Mus musculus


Alignment Length:120 Identity:26/120 - (21%)
Similarity:45/120 - (37%) Gaps:40/120 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LICGLGIELPTRTAAQFW-------SVDPVTQWRKEALAERGSGICYRTLTVETINPNSRNRQFS 68
            ::..:|:|| ..:....|       ::||.           |..:|..:...|.           
Mouse     1 MLAAMGLEL-VFSLLLLWTQGTQGSTLDPA-----------GQHVCKGSSPSEL----------- 42

  Fly    69 YCCDGYVNKGTSQNLKCE-PICS--EDC-SNGLCLAPEECECAPGYY--RSNKRC 117
            .||.|:..|    :.:|. |||.  :.| ...:|:.|..|.|.||::  :.:.||
Mouse    43 QCCPGWRQK----DQECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRC 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 14/60 (23%)
Scarf1NP_001004157.2 PHA03247 <541..781 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..820
Blue background indicates that the domain is not in the aligned region.

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