DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and NimB1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster


Alignment Length:88 Identity:22/88 - (25%)
Similarity:37/88 - (42%) Gaps:28/88 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GSGICYRTLTVETINPNSRNRQFSY--------------------CCDGYVNKGTSQNLKCEPIC 89
            |:.:|::...::     ...|||..                    |..||   ..:.:|.|:|:|
  Fly   158 GTCVCHQNFVLD-----QETRQFCRPKCSQSCGTHEECVAPGQCDCSPGY---RRTPDLGCQPVC 214

  Fly    90 SEDCSNGLCLAPEECECAPGYYR 112
            :.||..|.|:||.:|||..|:.:
  Fly   215 APDCGFGKCVAPNQCECFAGFIK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 18/76 (24%)
NimB1NP_001260452.1 None

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