DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Pear1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_063137697.1 Gene:Pear1 / 295293 RGDID:1305653 Length:1068 Species:Rattus norvegicus


Alignment Length:132 Identity:36/132 - (27%)
Similarity:53/132 - (40%) Gaps:38/132 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIGLLICGLGIELPTRTAAQFWSVDP--VTQWRKEALAERGS----------------------- 46
            |..||:..||:    |.|....|.||  .|.|.......:.|                       
  Rat    38 LCPLLLLALGL----RLAGTLNSNDPNVCTFWESFTTTTKESHLRPFSLPPAESCDRPWEDPHTC 98

  Fly    47 ---GICYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECECAP 108
               .:.|||:..:.:..:||.|  ..||.||.....:    |.|:|:::|.:|.|:||..|:|||
  Rat    99 AQPTVVYRTVYRQVVKMDSRPR--LQCCGGYYESSGA----CVPLCAQECVHGRCVAPNRCQCAP 157

  Fly   109 GY 110
            |:
  Rat   158 GW 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 19/56 (34%)
Pear1XP_063137697.1 None

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