DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Megf10

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001094127.1 Gene:Megf10 / 291445 RGDID:735084 Length:1145 Species:Rattus norvegicus


Alignment Length:138 Identity:34/138 - (24%)
Similarity:56/138 - (40%) Gaps:35/138 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSTLIGLLICGL---------GIELPTRTAAQFWSVDPVTQWRKEALAERGSGICYRTLTVETIN 59
            :|:.:| |||.|         .:.|........|....||.  :|:.......|.|.:.| :.:|
  Rat     5 SSSCLG-LICSLLCHWLRAASSLNLEDPNVCSHWESYSVTV--QESYPHPFDQIYYTSCT-DILN 65

  Fly    60 ------------------PNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECEC 106
                              ..:..|:.|.||.|:..   |::: |.|.|::.|.:|.|:||..|:|
  Rat    66 WFKCTRHRVSYRTAYRHGEKTMYRRKSQCCPGFYE---SRDV-CVPHCADKCVHGRCIAPNTCQC 126

  Fly   107 APGYYRSN 114
            .||:..:|
  Rat   127 EPGWGGTN 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 18/74 (24%)
Megf10NP_001094127.1 EMI 31..100 CDD:462204 13/71 (18%)
EGF_Lam 281..318 CDD:214543
EGF_CA 542..587 CDD:473889
Blue background indicates that the domain is not in the aligned region.

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