DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Scarf2

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_038944006.1 Gene:Scarf2 / 287949 RGDID:1306013 Length:838 Species:Rattus norvegicus


Alignment Length:102 Identity:28/102 - (27%)
Similarity:37/102 - (36%) Gaps:29/102 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EALAERGSGICYR-----------------TLTVETINPNSRN------RQFSYCCDGYVNKGTS 80
            |....||:|...|                 ....:.:||..||      .|...||.|:...|..
  Rat     2 EGAGSRGAGPARRQGARGPPLLLLLWLLPGLAAAQDLNPRGRNVCRTPGSQVLTCCAGWRQLGDE 66

  Fly    81 QNLK-CE--PICSEDCSNGLCLAPEECECAPGYYRSN 114
            ..:. ||  ..|||   |.:|:.|.||.|..||:.:|
  Rat    67 CGIAVCEGNSTCSE---NEVCVRPGECRCRHGYFGAN 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 20/82 (24%)
Scarf2XP_038944006.1 PHA03247 <683..837 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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