DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Stab2

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_038934443.1 Gene:Stab2 / 282580 RGDID:628822 Length:2561 Species:Rattus norvegicus


Alignment Length:94 Identity:23/94 - (24%)
Similarity:30/94 - (31%) Gaps:28/94 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCE-------PICSE---DCSNGLCLAPE- 102
            |....|.....||.  .....|..|..|.|.:.:..||       |.|.:   :|:..||  || 
  Rat   155 CEACATDNVFGPNC--SAVCSCVHGVCNSGLNGDGTCECLSAYRGPKCDKPIPECATLLC--PEN 215

  Fly   103 -------------ECECAPGYYRSNKRCR 118
                         :|:|.|.|......||
  Rat   216 SRCSPSSKDETKLQCKCLPNYEGDGHNCR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 18/80 (23%)
Stab2XP_038934443.1 EGF_3 254..283 CDD:463759
EGF_3 334..369 CDD:463759
Fasciclin 390..512 CDD:396845
FAS1 511..658 CDD:441906
EGF_3 840..868 CDD:463759
EGF_3 881..912 CDD:463759
EGF_3 923..955 CDD:463759
EGF_3 961..997 CDD:463759
Fasciclin 1014..1133 CDD:396845
Fasciclin 1152..1269 CDD:396845
EGF_3 1478..1514 CDD:463759
EGF_3 1520..1556 CDD:463759
EGF_3 1562..1598 CDD:463759
Fasciclin 1629..1729 CDD:396845
Fasciclin 1754..1885 CDD:396845
EGF_3 2059..2084 CDD:463759
EGF_3 2090..2125 CDD:463759
EGF_3 2131..2168 CDD:463759
Link_Domain 2202..2294 CDD:470631
FAS1 2360..2449 CDD:214719
Blue background indicates that the domain is not in the aligned region.

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