DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Stab2

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_619614.1 Gene:Stab2 / 192188 MGIID:2178743 Length:2559 Species:Mus musculus


Alignment Length:99 Identity:24/99 - (24%)
Similarity:34/99 - (34%) Gaps:29/99 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RGSGICYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCE-------PICSE---DCSNGLC 98
            ||:. |......:...||.  .....|..|..|.|.|.:..||       |.|.:   :|:..||
Mouse   151 RGTA-CENCAAEDVFGPNC--SAVCSCVHGVCNSGISGDGTCECLSAYRGPRCDKPIPECAALLC 212

  Fly    99 LAPE--------------ECECAPGYYRSNKRCR 118
              ||              :|:|.|.|....:.|:
Mouse   213 --PENSRCSPSSKDETKLQCKCLPSYKGDGQTCK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 18/80 (23%)
Stab2NP_619614.1 EGF_3 254..283 CDD:463759
EGF_3 334..369 CDD:463759
Fasciclin 390..512 CDD:396845
Fasciclin 533..661 CDD:396845
EGF_3 844..872 CDD:463759
EGF_3 881..916 CDD:463759
EGF_3 927..959 CDD:463759
EGF_3 965..1001 CDD:463759
Fasciclin 1018..1137 CDD:396845
Fasciclin 1156..1273 CDD:396845
EGF_3 1482..1518 CDD:463759
EGF_3 1524..1560 CDD:463759
EGF_3 1566..1602 CDD:463759
Fasciclin 1628..1733 CDD:396845
Fasciclin 1758..1889 CDD:396845
Laminin_EGF 1978..2022 CDD:395007
EGF_3 2094..2129 CDD:463759
EGF_3 2135..2172 CDD:463759
Link_Domain 2206..2297 CDD:470631
FAS1 2363..2452 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000250 2510..2520
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2514..2559
Blue background indicates that the domain is not in the aligned region.

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