DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and Stab1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_619613.2 Gene:Stab1 / 192187 MGIID:2178742 Length:2571 Species:Mus musculus


Alignment Length:74 Identity:17/74 - (22%)
Similarity:28/74 - (37%) Gaps:20/74 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GSGICYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCS-NGLCLAPEECECAP 108
            |||.|                   :|.:|:........|:.:|:|:..|: ..:|.....|||:.
Mouse  2035 GSGSC-------------------FCDEGWTGARCEVQLELQPVCTPPCAPQAVCRLGNSCECSL 2080

  Fly   109 GYYRSNKRC 117
            ||....:.|
Mouse  2081 GYEGDGRVC 2089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 9/57 (16%)
Stab1NP_619613.2 FAS1 499..644 CDD:441906
EGF_3 831..860 CDD:463759
EGF_3 915..946 CDD:463759
EGF_3 952..988 CDD:463759
Fasciclin 1000..1121 CDD:396845
EGF_3 1460..1496 CDD:463759
EGF_3 1502..1539 CDD:463759
EGF_3 1545..1582 CDD:463759
Fasciclin 1607..1711 CDD:396845
Fasciclin 1737..1867 CDD:396845
EGF_Lam <1992..2021 CDD:214543
EGF_3 2095..2130 CDD:463759
EGF_3 2136..2173 CDD:463759
Link_Domain 2208..2300 CDD:470631
FAS1 2367..2463 CDD:214719
Blue background indicates that the domain is not in the aligned region.

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