DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and dsl-1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_500054.1 Gene:dsl-1 / 176939 WormBaseID:WBGene00001103 Length:252 Species:Caenorhabditis elegans


Alignment Length:77 Identity:18/77 - (23%)
Similarity:31/77 - (40%) Gaps:29/77 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YCCDGY---VNKGTSQN-----------LKCE-PICSEDC---SNGLCLAPEE----------CE 105
            :|.|.:   :|:..:||           ..|| |:.::.|   :.|.|::..|          ||
 Worm   134 FCNDDFARTINRRCTQNGTLGCLEGFHGPNCELPVPADSCKCQNGGKCVSSLENTWAQNGSLICE 198

  Fly   106 CAPGYYRSNKRC 117
            |..|:: ..|.|
 Worm   199 CRLGHF-EGKHC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 13/64 (20%)
dsl-1NP_500054.1 DSL 112..164 CDD:473190 5/29 (17%)
EGF_CA <175..210 CDD:238011 9/36 (25%)

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